SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015391228.1.5354 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015391228.1.5354
Domain Number 1 Region: 1936-2095
Classification Level Classification E-value
Superfamily C-type lectin-like 1.1e-43
Family C-type lectin domain 0.000000392
Further Details:      
 
Domain Number 2 Region: 150-279
Classification Level Classification E-value
Superfamily C-type lectin-like 5.64e-43
Family Link domain 0.0015
Further Details:      
 
Domain Number 3 Region: 411-520
Classification Level Classification E-value
Superfamily C-type lectin-like 5.23e-42
Family Link domain 0.0015
Further Details:      
 
Domain Number 4 Region: 516-629
Classification Level Classification E-value
Superfamily C-type lectin-like 8.44e-30
Family Link domain 0.0048
Further Details:      
 
Domain Number 5 Region: 33-151
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000935
Family V set domains (antibody variable domain-like) 0.029
Further Details:      
 
Domain Number 6 Region: 2096-2156
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000417
Family Complement control module/SCR domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015391228.1.5354
Sequence length 2181
Comment PREDICTED: aggrecan core protein [Panthera tigris altaica]; AA=GCF_000464555.1; RF=representative genome; TAX=74533; STAX=9694; NAME=Panthera tigris altaica; AL=Scaffold; RT=Major
Sequence
MTTLLLVFVTLRVITAASAIEASDPDNSLSVSIPEPSPLRVLLGSSLTIPCYFIDPMHPV
TTAPSTAPLSPRIKWSRISKEKEVVLLVATEGQVRVNGAYQDKVSLPNYPAIPSDATLEI
QNLRSNDSGMYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEDMEGEVFYATSPEKFTFQEAANECRRLGEDFVDIPENFFGVGGEEDITIQT
VTWPDVELPLPRNVTEGEARGNVILTVKPIFDVSPTIPEPEEPFTFVPEVGTTAFPEAEN
RTGEATRPWGVPEESTPGLAFTAFTSEDHVVQVTAVPGATEVPGRPRLPGGVVFHYRPGS
ARYALTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLQDQTVRYPIVSPRTPCV
GDKDSSPGVRTYGVRPPSETYDVYCYVDRLEGTREVFFVTRPEQFTFEEALAFCESHNAT
LASTGQLYAAWSQGLDKCYAGWLSDGSLRYPIVTPRPSCGGDKPGVRTVYLYPNQTGLPD
PLSRHHAFCFRGVSAAPSPGEEEGGTATPSVEEWITTQVVPGVAAVPSGEETTTSPEFTT
EPENQTEWELAYTPVGTSPSPGIPPTWPPTSAATEESTEGPSGTEVPSASEEPSPSEEPG
PSEEPFPWEEPSTLAPPVPSGTELPGSGEASGVPEVSGDFTGSGEVSGRLDSSGQPSGEI
SSGLPSGDLDSSGLTSAVGSGLPVESGLASGDEDRITGPSIPKVEGEGLETSASGVGDLS
GLPSGEGPEVSASGIGDVSGLPSGREDLETSASGVGDLSGLPSGEGPEVSASGIGDVSGL
PSGREDLETSASGVGDLSGLPSGEGPEVSASGIGDVSGLPSGREDLETSASGVGDLSGLP
SGEGPEVSASGIGDVSGLPSGREDLETSASGVGDLSGLPSGEGPEVSASGIGDVSGLPSG
REDLETSASGVGDLSGLPSGEGPEVSASGIGDVSGLPSGREDLETSASGVGDLSGLPSGE
GPEVSASGIGDVSGLPSGREDLETSASGVGDLSGLPSGEGPEVSASGIGDVSGLPSGRED
LETSASGVGDLSGLPSGEGPEVSASGIGDLSGLPSGREDLETSASGVGDLSGLPSGVEGH
PETSASGVGDLSEFYSGGEGLETSASGAEELSGLPSGKEDLIGSASGDLDLGRIPSGTLG
SGQAPEASGLPSGFSGEYSGVDLGSGPSSGLPDFSGLPSGFPTISLVDTTLVEVVTTTAA
SELEGRGTIGISGAGETSGLPSSELDISGAVSGLPSGAELSGQASGSPDISGETSGFFGV
RGQPSGFPDISGGTSGLFEVSGQASGFSGETSAVTELSGLVSGQPDVSGEASGVLSGSGQ
PFGITDLSGETSGVPGVSGTTSGIPDLVPSAVSGSGESSGITFVDTSLVEVTPTTFKEEG
LGSVELSGLPSGEAGLSGTSGIMDVSGRSSGAVDSGGFTSPPPEFSGLPSAVAEVSGESS
GAEIGSSLPSGAYDGSGLASGFPTVSLVDRTLVESVTQAPTAQEAGEGPSGIVELSGAHS
GAPDVSGDHSGFLDLSGPQSGLVEPGGEPSSTPYFSGDFSGTVDVSGESSAATGTSGEAS
GLPEVTLITSEFVEGVTEPTVSQELAQRPPVTHTPRLFESSGEASASGEMSGATPTFPGS
GVGSVPESSSETPAFPEAGAGASAAPEASGGASGSPDVGETTSTFPDADVEGGSGLAVTG
STSAFPEGPGEGSATPEAREEPATTHDVGTEASGWASATPMASGDRTEIGGDLSGHTSGL
DVVIGTSVPESEWTQQTQRPAEAHLEIESSSPLHSGEETQTAETATFPTDASIPTPPGGT
DESAATVADIDECLSSPCLNGATCVDAIDSFTCLCLPSYRGDRCEIDQELCEEGWTKFQG
HCYRYFPDRESWVDAESRCRAQQSHLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDFR
WSDGHSLQFENWRPNQPDNFFVSGEDCVVMIWHEKGEWNDVPCNYYLPFTCKKGTVACGD
PPVVEHARTFGQKKDRYEINSLVRYQCAEGFVQRHVPTIRCQPSGHWEEPRITCTDPSTY
KRRLQKRSSRPARRSRPSTAH
Download sequence
Identical sequences XP_015391228.1.5354

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]