SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015457777.1.101067 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015457777.1.101067
Domain Number 1 Region: 270-435
Classification Level Classification E-value
Superfamily ARM repeat 0.000000538
Family Clathrin adaptor core protein 0.037
Further Details:      
 
Domain Number 2 Region: 4-152
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000000737
Family APC10-like 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015457777.1.101067
Sequence length 757
Comment PREDICTED: centrosomal protein of 104 kDa [Astyanax mexicanus]; AA=GCF_000372685.1; RF=representative genome; TAX=7994; STAX=7994; NAME=Astyanax mexicanus; AL=Scaffold; RT=Major
Sequence
MPRKIGFTVVSWSGHEENYSAKELMIHAPTVSGWRSARFCPFPQEITLQMVERCHVKKLQ
LLAHQYLISAKVEFHIGDRLPEPASPQNSQQLRRLGYVSLSNNEKTGLRARELKSVHVDA
VGTYLKLTFHRNHANQYNLYNQVALVAINILGDSVDFSDVSPISSRDQLIEQYLSSTQHS
SALDSSYTGSKYESISPLDDLAFDMYQDPEVAHIIRLLDDKKQDMVRLERYDLAKKLKQA
IADLQKYVCASGSCVAGLPPKFHSVCFGIKNVTVRVASSSSYLVQVFQASVKLLKMILGE
FVSSHQLGRSEVSYCVEQTLPVLLSRTGETTPRLRTLALTCVQEIAVYKEVRLVQLVPSE
LVKPIKLSLPSRLALSRLQLLEKLLEQLGFKDSGFTLENVMRFLVGALEHSAASVRELAV
RLVQMMYRNHGAAVLIYLPPDDASERKTLIYKNLFLSFAKIDGKLPDPQVKPPCCTIKPY
RQTHRQPHHHPSSPVSPLFPSANLINNLTTNFITITASLTANLTPSNLTAKLITSLSANL
TSKPHRQPHPIKPHRIKKETPSMSGDAGNRNQSAGANNFDNLYSYCPMLCRCLHCRQVVE
ISSLTEHLLSECERRADFIQCFRCSEAVVRDRLTEHAQNCSPLPVSGSCNHCPLCHQNAA
PGEEGWKSHLMYSSAGCTQNPRRIQQHRTHTQGKTINTGTSKPAGGGGGGGGGGAAVFAG
GKGRGDSRSSSRIPAPKPSRTSRVSPAKTQNLRPGPA
Download sequence
Identical sequences XP_015457777.1.101067

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]