SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015624839.1.37577 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015624839.1.37577
Domain Number 1 Region: 219-444
Classification Level Classification E-value
Superfamily TPR-like 1.02e-26
Family Tetratricopeptide repeat (TPR) 0.011
Further Details:      
 
Domain Number 2 Region: 493-676
Classification Level Classification E-value
Superfamily Thioredoxin-like 2.01e-24
Family Thioltransferase 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015624839.1.37577
Sequence length 692
Comment PREDICTED: TPR repeat-containing thioredoxin TTL1 [Oryza sativa Japonica Group]; AA=GCF_001433935.1; RF=representative genome; TAX=39947; STAX=4530; NAME=Oryza sativa Japonica Group; AL=Chromosome; RT=Major
Sequence
MSEADRIRVRAAALALDGGGGGAVRDKPDAKADVFADLGSPVSPLRARASVATSSSSSSG
SAKSPAPSNAGALALAGGRSHSGELTAESTPPRLPGHRRCGSGPLIFSGGSSGGSGGGGG
DRGSTASSPMTNALPAGNICPSGRVPVAAAAPPPPRSRPDVLGSGTGNYGHGSIMRGGGG
MAPARSSIDSSSFLGHAPRSPATFPAASSASSGSLQDVTRLGNEWYKKGKHAEALRHYDR
AVALCPESAACRGNRAAALAGLGRLADALRDCEEAVRLDPANGRAHSRLAGLCLRLGMIS
KARRHLTQAGHLHQSDPSEWEKLQEVEMHQGRSIDARKVGDWKSALREADAAIAAGADSS
RLLLAIRSEALLRLHKLEEADSTLASLLKLDSVLLYRMGANPSGMLAESYVSIVRAQVDM
ALGRFDAAVEAADNARFIDPGNAEVGMILNNVKLVAKARAQGNELYKAAKFSDASIAYSE
GLKYEPSNPVLYCNRAACWGKLERWEKAVDDCNEALRIQPNYTKALLRRASSYAKLERWA
DCVRDYEVLHKELPADTEVAEALFHAQVALKTTRGEDVSNMKFGGEVEMVTSVEQLRAAI
GSPGVSVVYFMSIMNQQCTLITPSVNSLCSECPSLNFLKVNVEDSPMVAKAENVRIVPTF
KIYKDGVKVKEMICPSLHVLRYSVRHYAVSSS
Download sequence
Identical sequences Q5ZDK5
XP_015624839.1.37577 39947.LOC_Os01g42960.1 LOC_Os01g42960.1|PACid:21904512 LOC_Os01g42960.1|13101.m04424|protein

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]