SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015836852.1.52716 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015836852.1.52716
Domain Number 1 Region: 101-333
Classification Level Classification E-value
Superfamily L domain-like 2.21e-23
Family Internalin LRR domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015836852.1.52716
Sequence length 417
Comment PREDICTED: leucine-rich repeat protein 1 [Tribolium castaneum]; AA=GCF_000002335.3; RF=representative genome; TAX=7070; STAX=7070; NAME=Tribolium castaneum; strain=Georgia GA2; AL=Chromosome; RT=Major
Sequence
MKLVCSVRVENRLLPALAIKSKQKYAQSTLALCKHPNSEDYCIILFTNQNKNGTKYGVRG
NISQILTRFINDGKATIQFKMPPHDLFVQCDVLQLKSFLHLLKRVLENKISPKELTCSSM
SVTPVAKNTAPKKLVIRSRAEYPARGFPRTLESLYVNGIKRCGLDIGILRLTKLKILDLS
QNCIEFIPEELNKLHLSEVNLSQNCLNKSSPRQWAWLGGNLSKSLTLLNLESNNLKYLPD
QLAKLYNLITLNVNNNELKFLPNCLSNLRNLRNLVASNNNLTVLPGSIKQCRFKFLDLFN
NNFEANSTEKIAPPTHLPVFSLKECAGRRVLELKLFYSSNTIPHTLVKYLDCAKYCECGK
ACFESFIRVPGSFLVSGITEDLIVSPNSMMLPLDCYFCSLRCFRTLHFTRSRNPVIR
Download sequence
Identical sequences D6WTS9
XP_015836852.1.52716 7070.XP_974822 TC009673

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]