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Domain assignment for XP_015988748.1.101085 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015988748.1.101085
Domain Number 1 Region: 29-142
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.36e-28
Family Spermadhesin, CUB domain 0.00052
Further Details:      
 
Domain Number 2 Region: 236-351
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000262
Family Spermadhesin, CUB domain 0.0042
Further Details:      
 
Domain Number 3 Region: 440-477
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000034
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 4 Region: 150-187
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000128
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 5 Region: 196-236
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000929
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 6 Region: 401-438
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000196
Family LDL receptor-like module 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_015988748.1.101085
Sequence length 628
Comment PREDICTED: low-density lipoprotein receptor-related protein 3 isoform X3 [Rousettus aegyptiacus]; AA=GCF_001466805.2; RF=representative genome; TAX=9407; STAX=9407; NAME=Rousettus aegyptiacus; AL=Scaffold; RT=Major
Sequence
MWGSSAPSRCFLPKGEASTFRPPLLTAACSGKLEQHTERRGVIYSPAWPLNYPPGTNCSW
YIQGDRGDMITISFRNFDVEESHQCSLDWLMLGPAAPPRQEAFRLCGSAIPPAFISARDH
VWIFFHSDASSSGQAQGFRLSYIRGKLGQASCQSDEFRCDNGKCLPGPWQCNTVDECGDG
SDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPAERRCDGTQDCGDGSDEAGCPDLAC
GRRLGNFYGSFASPDLFGAARGPSDLHCTWLVDTQDPRRVLLQLELRLGYDDYVQVYEGL
GERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQP
CGSSSEADVSDVGEQGCFSEPQRCDGWWHCASGRDEQGCPACPPDQYPCEGGSGLCYTSA
DRCNNQKSCPDGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVP
RKVITAALIGSLVCGLLLVIALGCAFKLYSLRTQEYRAFETQMTRLEAEFVRREAPPSYG
QLIAQGLIPPVEDFPVYSASQPLPHPPGLCAAEPSNGHATTNAPARLPPRALPPPPRPPL
EPALSPASGSTWTNPAADCYPHLTDSAG
Download sequence
Identical sequences XP_015988748.1.101085

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