SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_016072633.1.3490 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_016072633.1.3490
Domain Number 1 Region: 482-539
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.52e-26
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 2 Region: 370-427
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.67e-26
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 3 Region: 314-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.71e-24
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 4 Region: 258-315
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.78e-24
Family Classic zinc finger, C2H2 0.0033
Further Details:      
 
Domain Number 5 Region: 426-483
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.9e-22
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 
Domain Number 6 Region: 67-133
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.37e-21
Family SCAN domain 0.00029
Further Details:      
 
Domain Number 7 Region: 556-608
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.82e-21
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 8 Region: 220-272
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.94e-20
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_016072633.1.3490
Sequence length 614
Comment PREDICTED: zinc finger and SCAN domain-containing protein 2 isoform X1 [Miniopterus natalensis]; AA=GCF_001595765.1; RF=representative genome; TAX=291302; STAX=291302; NAME=Miniopterus natalensis; AL=Scaffold; RT=Major
Sequence
MAAEVPGVTTPLSPLVQVPQEEDEQEAEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAG
KGSPREEAAGGPQGALGRLRELCRRWLRPEVHTKEQMLTVMPREIQAWLQEHRPESSEEA
VALVEDLTQTLRDRDFEIHSENGENSNQDIFEDVESHEIFSDMPEGEGVQQSDWESDFER
NCPSRRPQGNASSKDHRDVPSQGREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITH
ERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIH
TGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEK
PYECKECGESFSYNSNLIRHQRIHTGEKPYKCPDCGQRFSQSSALITHRRTHTGEKPYQC
SECGKSFSRSSNLATHRRTHLVEKPYKCGECGKSFSQSSSLIAHQGMHTGEKPYECLTCG
ESFSWSSNLIKHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYECLMCGKSFS
RGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSN
FITHQRTHMKEKLY
Download sequence
Identical sequences XP_016072633.1.3490

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]