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Domain assignment for XP_016277408.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_016277408.1.35504
Domain Number 1 Region: 342-388
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000314
Family TSP-1 type 1 repeat 0.00092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_016277408.1.35504
Sequence length 853
Comment PREDICTED: thrombospondin type-1 domain-containing protein 1 isoform X1 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MKQMLKDFSNLLLVVLCDYVLGEAEYIFLGQPDHVALSNKTVSVDFLYSDGNNATMRNVS
ILLLDASKNQTIATKHLLTNQFQGTLEFECFYFREAGDYWFILSPAKMDNSTRDSWQEKH
AFLKVEWPVFHIDFNQTSKATGDTLQVGLFTNQPLCSFTTDRPDILVELIFTNSISELKE
SRDQPLEIRISKRISLAPVQWIEFDCAPIGPQAYATVLLKLQDTSTVITSTGPIDLVQRF
GYKLVTLPELKCESLVDVMIVPPPCTFAQGMVTVYKDTTRHSGERLGWLAENIVPLGASK
TAFNCTLFAMGKNKYCFEFSFSSRSHFSSGENCMVIQRNIETWSLWQAWNPCSVTCGDGV
RDRRRTCLTSSPSKPGCVGTSTETSLCSLEECSSFNPSSPSPAQPKGPLKANNIVTVTGI
SLCLFIIIATVLITLWRKFGRPPKCSTPARHNSIHSPNFRKNSDEENICQLSEQRGSFSD
GDEGALGSPAEISIPLTYRRSMQLTPEEEVSGSESFQSSAQKIIPPLFSYRLAQKQLKEM
KRKGLTETTKVYHVSQSPLTDTVVEGAAGAALDPEGPEEASTNKFRIKSPFLDQPSINAG
ERTHSRLDFNVSLTNPALSPSQTLIRKSQLKYVGSKGGQSERSYPRHSHFRRTASFHETK
QVRPFRERSMSTLTPRQIPAYSARTRTWDQGEDRFRARARGAYPCPEKLEHPQGTRIVTE
PLSPLSKSYPMGLPARKPDLINDRPAGLVNGTDRVEPHRHKRGPSPSHKSVSRKQPSPTT
PKDSYQRGSPLSPPQYRRDKCQSFPAHPEYAFYDNTSFGLTELEQRMLDLPGYFGSNEED
ETTSTLSIEKLVI
Download sequence
Identical sequences F7A7B0
ENSMODP00000013042 13616.ENSMODP00000013042 ENSMODP00000013042 XP_001368354.1.35504 XP_016277408.1.35504

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