SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_016828900.1.28591 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_016828900.1.28591
Domain Number 1 Region: 206-470
Classification Level Classification E-value
Superfamily Kelch motif 1.03e-41
Family Kelch motif 0.0071
Further Details:      
 
Domain Number 2 Region: 562-731
Classification Level Classification E-value
Superfamily C-type lectin-like 4.02e-26
Family C-type lectin domain 0.001
Further Details:      
 
Domain Number 3 Region: 868-914
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000001
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 4 Region: 2-61
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000249
Family Spermadhesin, CUB domain 0.0067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_016828900.1.28591
Sequence length 1094
Comment PREDICTED: attractin-like protein 1 isoform X8 [Cricetulus griseus]; AA=GCF_000419365.1; RF=na; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
MYVYDGDSIYAPLVAVLSGLIVPEVRGNETVPEVVTTSGYALLHFFSDAAYNLTGFNIFY
SINSCPNNCSGHGKCTASVLVASQVYCECDKYWKGEACDIPYCKANCGSPDHGYCDLTGE
KLCVCNDSWQGPDCSLNVPSTESYWILPNVKPFSPSVGRASHKAVLHGKFMWVIGGYTFN
YSSFQMVLNYNLESSIWNVGAVSRGPLQRYGHSLALYQENIFMYGGRIETSDGNVTDELW
VFNIPSQSWSTKTPTVLGHGQQYAVEGHSAHIMELDSRDVVMIVIFGYSAIYGYTSSIQE
YHISSNTWLVPETKGAIVQGGYGHTSVYDEVTKSIYVHGGYKALPGNKYGLVDDLYKYEV
NTKTWTILKESGFARYLHSAVLINGAMLIFGGNTHNDTSLSNGAKCFSADFLAYDIACDE
WKTLPKPNLHRDVNRFGHSAVVINGSMYIFGGFSSVLLSDVLVYKPPDCRAFQDEELCRN
AGPGIKCVWNKNHCESWETGNANTILRAKCPPKTAALDDRCYRYADCASCTANTNGCQWC
DDKKCISANSNCSMSVRNYTKCHVRNEQICNKLTSCKSCSLNLNCQWDQRQQECQALPAH
LCGEGWNHVGDACLRINSSRESYDNAKLYCYNLSGNLASLTTSKEVEFVLDEIQKYTQQK
VSPWVGLRKINVSYWGWEDMSPFTNTTLQWLPGEPNDSGFCAYLERAAVAGLKANPCTSM
ADGLVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCGSTKRCVDSNAYIISFP
YGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCNDPSDTGRGYCTEGSSRGPMRLGGA
HGSEVALDTSLCPKEKNYEWSFIQCPACQCNGHSTCIDSNVCEQCKNLTTGKQCQDCMPG
YYGDPTNGGQCTACTCSGHANICHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRGTC
YYSLLIDYQFTFSLLQEDDRHHTAINFIANPEQSNKNLDISINASNNFNLNITWSVGSTG
GTISGEETPIVSKTNIREYRDSFSYEKFNFRSNPNITFYVYVSNFSWPIKIQSPLCPRKS
RLTPPCLAIGHSAL
Download sequence
Identical sequences XP_016828900.1.28591

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]