SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_016834233.1.69978 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_016834233.1.69978
Domain Number 1 Region: 860-917
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.05e-23
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 916-973
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.35e-22
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 3 Region: 119-175
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.29e-20
Family KRAB domain (Kruppel-associated box) 0.00054
Further Details:      
 
Domain Number 4 Region: 411-468
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.96e-18
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 5 Region: 467-524
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.23e-18
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 6 Region: 308-356
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.76e-17
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 
Domain Number 7 Region: 755-808
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.52e-17
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 8 Region: 523-580
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.04e-17
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 9 Region: 639-694
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.58e-16
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 10 Region: 355-412
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.37e-16
Family Classic zinc finger, C2H2 0.034
Further Details:      
 
Domain Number 11 Region: 565-617
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000206
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 12 Region: 823-874
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000276
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 13 Region: 681-730
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000791
Family Classic zinc finger, C2H2 0.022
Further Details:      
 
Domain Number 14 Region: 201-249
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000942
Family Classic zinc finger, C2H2 0.017
Further Details:      
 
Domain Number 15 Region: 263-310
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000311
Family Classic zinc finger, C2H2 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_016834233.1.69978
Sequence length 992
Comment PREDICTED: zinc finger protein 709 isoform X1, partial [Cricetulus griseus]; AA=GCF_000223135.1; RF=representative genome; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
SLGRLKQFSEGLRSNKVHNRVRSGVHSGRTQIGTGQASALPRSPPGAPSGCHKFSGDLKP
ARDSDGEVVTLRLRKILPLPTFHGFPGLRPAPVSVPFLQWRSGAVGVALRRGGACELSDF
LAFEDVAVKFSQEEWILLDPSQKKLYRDVMLETCINLTSLGIKWEDKNIEEQYKHSWRYL
RSYMVDAINEHKEGGQFQETYIWIRNLHSIANISTGIKLFECGVCEKVFTCHSSFKEHIM
SHLGDKSSEHKYGSFGIQQQSHSGEKFCKKCGMAFICPCSFSVDGRTNTEDKCYECMPCG
KALSSSSSLQRVHTGERPYECEHCGKFFRHQSSFRLHKLTHIGGKPYECKQCGKAFRCYN
YLQLHEIFHIEENPLECKQCGKTLCSPSSLRFHERIHNAEKLYICKQCGKAFKCQSYLRM
HERSHNGEKCYDCKQCGKAFRSHCSLQRHKVAHPGEKPYTCNLCGKSFTYPYLLQTHGRF
HTGEKPYKCKLCNKAFLCSPFLQTHKRTHTWGKPYKCKQCGETFRSHSFLRSHTRAHTVE
KPYKCKICSKAFLCFPYLQRHERAHTEEKLFECKQCSKIFRDWSTFQVHERSHIVEKPYK
CKKCSKAFFYPSSLERHEKIHKGEKHYACKYACKQCGQSFIFPCLLERHLRSHTTEKPYE
CKHCGKAFRSLTYIHIHKRTHTEERLYTCKQCDKSLSCPSALQFHELTHTREKPHACLQF
DKTIRKLSYFQVPEKALTEEKTYTCQQCGKILDCASSLQLHERIHTGEKSHECKQCGKTF
TVLSSLRVHEMSHRHEKPYECKQLGQVFSLSNIHEIKKAEGNPCECKQCGKTFVSRYLLQ
MHERSHSAEKRYECKVCGKTFIYPSFLQRHERTHTGEKPYECKQCGKAFRVQSSLRLHER
THSEEKPYECQHCGKAFWRFPSLQVHERIHTGEKPFECKQCDKTFRCHSSLQRHERTHSQ
EKPYECEQCGKAFRCHRSFQRHGKTHAGEKAT
Download sequence
Identical sequences XP_016834233.1.69978

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]