SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_016892669.1.100486 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_016892669.1.100486
Domain Number 1 Region: 634-763
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 6.85e-30
Family Synaptotagmin-like (S variant) 0.00000489
Further Details:      
 
Domain Number 2 Region: 1338-1458
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 1.21e-24
Family Synaptotagmin-like (S variant) 0.0044
Further Details:      
 
Domain Number 3 Region: 25-153
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.53e-23
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0037
Further Details:      
 
Domain Number 4 Region: 466-583
Classification Level Classification E-value
Superfamily PDZ domain-like 6.79e-18
Family PDZ domain 0.0000585
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_016892669.1.100486
Sequence length 1487
Comment PREDICTED: regulating synaptic membrane exocytosis protein 1-like isoform X12 [Cynoglossus semilaevis]; AA=GCF_000523025.1; RF=representative genome; TAX=244447; STAX=244447; NAME=Cynoglossus semilaevis; AL=Chromosome; RT=Major
Sequence
MFASVGPRGGPRPPVSSAIPEPDLSHLTEEERKIIMAVLARQREEEAKEEAMLKGIQQQL
SSYRETVIRQASSATGSAVHRDDAPTCGICHKTKFADGCGNLCSYCQTKFCARCGARVSL
RSNTQDKVIIWVCNNCRKQQEILTKPGDWFARTSGKPGGLGSAVSEPSVCQTSGDKKLRS
RSQAPSDSSAVIQDPNRSSVPGTTSGTDSRSRSEPPRHTRNGRRVGRGDRRSGPPRLQTQ
VSMDREPQGDSRERRESRKLTKGRSLEHDPVGGGGGGGAGGVRRTEEGGYRQVDHNGATP
GQAGQVPPGGRGHAGSLQGRGMGVVGEHGDGARHGQRTVGGVGGQHEPALSEQAPPPELR
EPPGSGPGIAPGQGPVVKRTKREKAESMLRNDSLSSDQSESLRPPPPRPYKSKRGLGAGG
KRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGDWECYPHDPTVWHHPVTWQPSKEGDH
LIGRITLSKRSAAMPKEAGALLGLKVVGGRVTESGRLGAFITKVKKGSLADVVGHLRAGD
EVLQWNGKLLPGATMKEVYNIILESQSEPQVELVVSRPIGVCRKYHDIPRIPDTSHPPLE
STGSSSFESQKMERPSLNVLSPSSPGMLQDAPQLMPGQLSVKLWYDKVGHQLIVNVLQAV
ELPLRPDGRPRSPYVKMYFLPDRSDKSKRRTKAVKKTCEPKWNQTFVYPHVHRRDFRNHM
LELTVWDQPRSPEEDSTFMGEILIELETALLDDKPHWYPLQTHDVSSIPLPRPSPFLPRR
HAHTDTPGKKLQRSQRVTEPEFDEGTTVVSKAADGRGRERQRESSSTLEVPDQQRTPSHH
IRSRSVSPHREEQGRLRSRPPNVPAQRSLDDELPHSRRSRSPNRFYDSARGRHQEEEYVD
DSEIIMIHQSMRGKSAECLHTRRANRHSNTLPPKMPLLFNGINKHTKSDLQPSLDRVRSA
SANCLTPDKHVPSSETERRTLSHSLPRRRPPSPRILIQHASPEDDRQPRTLETPECQTVG
RKLSDGDRGHLQSGASLSSSVMSSSARKVRQLPQLPPKSNTAEQALVAEERVRQLQMRVH
SNRVSAANPSSQQDLDRALKNKRDLYKDQRRRSSENVSHKSSDSDVSDVSAISRTSSASR
ISSTSYMSIQSERPRGRFSRAIRATGRHIIKSTSVSGEIYGMEHADGSQSDTALGSLGSG
IKKRRSSLSQRVVAILPSRRSRSTSQLSQTEAAGKAVDRQKEASAGKKVGKAGSSTIQRS
VETGMAVEYPRGGSAMNRQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGP
GQLVGRQTLATPAMGDVQIGLMDKKGQLEVEVIRARGLTPKSGSKSLPAPYVKVYLLDNG
TCKAKKKTKIARKTLEPLYQQHLLFEESPQGKVLQVIVWGDYGRLDHKCFMGVAQILLEE
LDLSSTVIGWYKLFPPSSLVDPTLAPLTRLASQTSLDSSGPPPGVRS
Download sequence
Identical sequences XP_016892669.1.100486

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]