SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017198002.1.1745 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017198002.1.1745
Domain Number 1 Region: 512-656
Classification Level Classification E-value
Superfamily vWA-like 0.000000000000579
Family Ku80 subunit N-terminal domain 0.062
Further Details:      
 
Domain Number 2 Region: 967-1054
Classification Level Classification E-value
Superfamily vWA-like 0.0000000252
Family Integrin A (or I) domain 0.017
Further Details:      
 
Domain Number 3 Region: 158-312
Classification Level Classification E-value
Superfamily vWA-like 0.000000413
Family Integrin A (or I) domain 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_017198002.1.1745
Sequence length 1059
Comment PREDICTED: von Willebrand factor A domain-containing protein 3A isoform X1 [Oryctolagus cuniculus]; AA=GCF_000003625.3; RF=representative genome; TAX=9986; STAX=9986; NAME=Oryctolagus cuniculus; breed=Thorbecke inbred; AL=Chromosome; RT=Major
Sequence
MATQTSHVFHGQENNFLENDCMRRNTDKDPKKQLNQETMNGLGQNPDDGLLVTHVNQTQD
LLRLQESKNQSSTSEDSEDWLSSHSLEFEKLTLADLVKQGTAVLEEGSNIMQKIRFPTQT
VCHFESKLSEAIELYQQRLQWLTENSNKAFGLIKGAKVGILIDTSAVGSGPQREQFQSDL
VQSLIDEQLSHKEKLYVLSFGTTTSSLWPDPVEVSASTLQELKLWVKKLQPEGGSNLLQA
LKKVFTLKELNSLVTIMGSCPDQPSEILSDYIQQATMGRGLFIHVVTYKCDGQLPPAVLK
NLAEALGGCYHCYSVETELCASREVDELLAEMQKAQSLLSHIQALRQSSPCEELTCMPKQ
FQKYQEKETGMMPLIFQISTEIAKGPLTSLLPKPPKHEAPLTIEFPNLDKTSAEWLKVNS
LKAKKLSLYQVLAPNAFSPVEEFVPILQKTVSSTIHEKAMVQFEWHDGTVKNIHVDPPLL
YEYQKQLSRAVRIFERRIEWLSLASRRIWGTVCEKRVVLLLDISATNSMYIIHIQHSLRL
LLEEQLSNKDSFNLIAFGATIESWRPELVPVTHDNLQSAWRWALTLQCGGSRNILSALRK
AVEVDFKDKDKHQSQGIYLFTGGIPDQDVSMLCAYMAEACSGCDLQLNVCLFYVGEPQMD
SIAPACYASRTDTATAYKEVTRATGGRFHWFGDTGIYESDDISSIISEMEKALNYSQKCA
FLVASLKNHSKKELESAALPKEKPKIPKQGSQPKKCCPPKPTAPAVARTNIQDGPDREKS
PSLKTLKWCPHSGRASASPAAAEPVKERTTAWRRKNKSRDTETSVSLFYTETGNNVGSVY
KKYPQGKGIRRIRGSIELPRKDAVCSSQEWVANYGLKKLKMEISRHIGPNCTHQKSAQRS
ASAKYCSCSAFPSVEIKGVVRHIQWTLREMEAYISRLEKLMRRYVQRLQWLLSGSRRLFG
AILESKVCILLDTSGSMGPHLQQVKTELTLLIWEQLRKRCDSFNLLSFAEGLQPWQDSLV
DTTDAACHKAMQWVAHLQAQGSTSVLQALLASSSTVLTL
Download sequence
Identical sequences XP_017198002.1.1745

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]