SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017352754.1.71028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017352754.1.71028
Domain Number 1 Region: 299-458
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 3.54e-45
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.000079
Further Details:      
 
Domain Number 2 Region: 197-295
Classification Level Classification E-value
Superfamily LCCL domain 2.88e-25
Family LCCL domain 0.00082
Further Details:      
 
Domain Number 3 Region: 84-193
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.5e-25
Family Spermadhesin, CUB domain 0.0009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_017352754.1.71028
Sequence length 756
Comment PREDICTED: discoidin, CUB and LCCL domain-containing protein 1 isoform X1 [Cebus capucinus imitator]; AA=GCF_001604975.1; RF=representative genome; TAX=1737458; STAX=9516; NAME=Cebus capucinus imitator; AL=Scaffold; RT=Major
Sequence
MGFGAGQRLSPGLAQRSAAEEAARRGQRRRRVRRGEAEPAKLAPGGAVVPGARALAGTAG
PGLLALLLAVSAPLRLQAEELGDGCGHLVTYQDSGTMTSKNYPGTYPNHTVCERTITVPK
GKRLILRLGDLDIESQTCASDYLLFTSSSDQYGPYCGSMTVPKELLLNTSEVTVRFESGS
HISGRGFLLTYASSDHPDLITCLERASHYLKTEYSKFCPAGCKDVAGDISGNMVDGYRDT
SLLCKAAIHAGIIADELGGQISVLQHKGISRYEGILANGVLSRDGSLSDRRFLFTSNGCS
RSLSLEPDGQIRASSSWQSVNESGDQVHWSPGQARLQDQGPSWASGDSSNNHKPREWLEI
DLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFR
DPVQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTTQSTSVSTEK
EDETITRPIPSEEMPTGMNITTVAIPLVLLVALLLAGMGIFAAFRKKKKKGSPYGSAEAQ
KTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGS
TFRPMDTDAEEAGAGADGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHLLRAHTFSA
QSGYRVPGLRPGHKHSLSSGGFSPAAGAGAQDRDYQRPQSPQPSDSGYDLPKAAGAVATE
SGHPDSQKPPTHPGKSYSAPRDCLTPLNQTAMTALL
Download sequence
Identical sequences A0A2K5QGV9
XP_017352754.1.71028

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]