SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017404024.1.71028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017404024.1.71028
Domain Number 1 Region: 125-224
Classification Level Classification E-value
Superfamily Thyroglobulin type-1 domain 3.66e-18
Family Thyroglobulin type-1 domain 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017404024.1.71028
Sequence length 321
Comment PREDICTED: epithelial cell adhesion molecule [Cebus capucinus imitator]; AA=GCF_001604975.1; RF=representative genome; TAX=1737458; STAX=9516; NAME=Cebus capucinus imitator; AL=Scaffold; RT=Major
Sequence
MGRRGGAARSCRSAFLPAARTKRKSFGEQAPSARSEDPLVAVLQTRTRAPQASRRQAGFS
SFAPGARPPASSRPFPSPSSRRADSMAPPQVLAFGLLLAAATATLAAAEEECHCENYKLA
VNCVMNSKGQCQCTSVGSQNTIICSKLASKCLVMKAEITNSKLGRRAKPEGALQNNDGLY
DPDCDESGLFKAKQCNGTSTCWCVNTAGVRRTDKDTEITCSERVRTLLCERVACPKHSKL
ICIQFFPQYEDNVITIDLVQNSSQKTQNDVDIADVAYYFEKDVKNNNYLSSTQVVSRKKR
MAKYQKAEIKEMGEMNRELNA
Download sequence
Identical sequences XP_017404024.1.71028

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]