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Domain assignment for XP_017450078.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017450078.1.100692
Domain Number 1 Region: 804-932
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 4.76e-31
Family Synaptotagmin-like (S variant) 0.00000105
Further Details:      
 
Domain Number 2 Region: 30-59,96-176
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 8.63e-24
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.01
Further Details:      
 
Domain Number 3 Region: 1593-1713
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 3.72e-23
Family Synaptotagmin-like (S variant) 0.0077
Further Details:      
 
Domain Number 4 Region: 618-740
Classification Level Classification E-value
Superfamily PDZ domain-like 3.46e-20
Family PDZ domain 0.00000187
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017450078.1.100692
Sequence length 1742
Comment PREDICTED: regulating synaptic membrane exocytosis protein 2 isoform X12 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MSAPLGPRGRPAPTPAASQPPPQPEMPDLSHLTEEERKIIQAVMDRQKKEEEKEQSVLKI
KEEHKPQPTQKLHQQFEMYKEQVKKMGEESQQQQEQKGDAPTCGICHKTKFADGCGHNCS
YCQTKFCARCGGRVSLRSNKEDKVVMWVCNLCRKQQEILTKSGAWFYNSGSNTPQQPDQK
ALRGLRSEEAPQEKKAKLHEQTQFQGPPGDSSVPAVERGRAHGLTRQDSIKNGSGMKHQI
ASDMPSDRKRSPSVSRDQNRRYDQSEEREEYSQYVPSDSTMPRSPSDYADRRSQREPQFY
EEPDHLNYRDSNRRGHRHSKEYIVDDEDVESRDEYERQRREEEYQARYRSDPNLARYPVK
PQPYEEQMRIHAEVSRARHERRHSDVSLANAELEDSRISLLRMDRPSRQRSVSERRAAME
NQRSYSMERTREAQGQSSYPQRTTNHSPPTPRRSPIPLDRPELRRADSLRKQHHLDPSSA
VRKTKREKMETMLRNDSLSSDQSESVRPPPPRPHKSKKGGKMRQVSLSSSEEELASTPEY
TSCDDVEIESESVSEKGDSQKGKRKTSEQAVWSDSNTRSERQKKVMYSGGHSLDEDLEWS
EPQTKDSGVDTCSSTTLNEERSHSDEHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSG
AMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVY
NIILESKPEPQVELVVSRPIGDMPRIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPG
MLRDVPQFLSGQLSSQSLSRRTTPFVPRVQIKLWFDKVGHQLIVTILGAKDLPSREDGRP
RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR
VREEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYMPRRQLHGESPTRR
LQRSKRISDSEVSDYDCEDGVGVVSDYRHDGRDLQSSTLSVPEQVMSSNHCSPSGSPHRV
DVIGRTRSWSPSVPPPQSRNVEQGLRGTRATGHYNTISRMDRHRVMDDHYSSERDSHFLT
LPRSRHRQTSEHHHRDGRDCEAADRQPYHRSRSTEQRPLLERTTTRSRSSERADTNLMRS
MPSLMTGRSAPPSPALSRSHPRTGSVQTSPSSTPVTGRRGRQLPQLPPKGTLERNNGVKE
IEPYEVITEDMDSTRKRNSGAMDIEERNRQMKLNKYKQVAGSDPRLEQDYHSKYRSGWDP
HRGADTVSTKSSDSDVSDVSAVSRTSSASRFSSTSYMSVQSERPRGNRKIRPKGGGEEGG
EGGRKQEGPAQKEQEAKEEGIREDGTGKEMAEPVHKERSGESGEEGKAQDAPEQGQEGEQ
SSKDDLQRSLSQDGCDDSFSPLVQECGAQAPVQPPLIPLGPDINVFTSKMQSRQMGVSGK
SMAKSTSISGDMCSLEKNDGSQSDTAVGALGTSGKKRRSSIGAKMVAIVGLSRKSRSASQ
LSQTEGGGKKLRSTVQRSTETGLAVEMRNWMTRQASRESTDGSMNSYSSEGNLIFPGVRL
ASDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQVGMMDKKGQLEVEIIRARGLVVKPGSK
TLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPLYQQLLSFEESPQGKVLQIIVWGDYGRM
DHKSFMGVAQILLDELELSNMVIGWFKLFPPSSLVDPTLAPLTRRASQSSLESSTGPSYS
RS
Download sequence
Identical sequences XP_017450078.1.100692

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