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Domain assignment for XP_017453259.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017453259.1.100692
Domain Number 1 Region: 402-459
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.47e-25
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 2 Region: 290-347
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.37e-24
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 3 Region: 459-515
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6e-24
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 4 Region: 178-235
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.29e-23
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 5 Region: 543-599
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.1e-22
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 
Domain Number 6 Region: 235-291
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.73e-22
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 7 Region: 346-403
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.4e-22
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 8 Region: 584-636
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.01e-21
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 9 Region: 10-68
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 5.89e-21
Family KRAB domain (Kruppel-associated box) 0.00018
Further Details:      
 
Domain Number 10 Region: 122-179
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.92e-20
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 11 Region: 74-123
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000455
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 12 Region: 505-537
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000149
Family Classic zinc finger, C2H2 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_017453259.1.100692
Sequence length 642
Comment PREDICTED: zinc finger protein 431-like isoform X2 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MVSVVLMYGIFQDALTYDDVHVNFTREEWALLDPSQKSLYKDVMQETYRNLSAIGYNWED
HTIEEHCQSFRRHGRHERCHTGEKPSENTQCGKAFAQRSHLQRHNRTRTGEKLYESKPRD
KAFTYDSQLQNLERIHTGEKPYKCNQCGKAFERHCNLGRHKLIHTGRKSYKCNQCGKAFS
QNSHLQSHKRIHTGEKSYECNQCGKAFKSHLYLQVHKRIHTGEKPYVCDQCGKDFVVQRD
LKRHKRTHTGEKPYKCDQCGKAFASHRYLQVHKRIHTREKLYECDQCGKAFAQLGHLQVH
GITHTGEKPYECDQCGKAFASHSYLQVHKRIHTGEKPYVCDWCGKAFASHSYLQVHKRIH
TGENLHECDQCGKAFASHSYLQVHKRIHTGEKLYECDQCGKAFTSHSYLQVHKRIHTGEK
PYVCDQCGKDFVVPSELKRHKRTHTGEKPYKCNECGKAFVGQNDLKKHKRIHTGEKPYKC
NECGKAFVWIGNLRTHKVLHTGEKPYKCNECGKAFACSTSLRTHKAIHTGVKPFECKQCG
KAFVGQNDLKRHERIHTGEKPYQCNECGKAFVFDASLRKHRAIHTGVKPYECKQCGKAFV
GQNDLKRHERIHTGEKPYECNECGKAFSQSSQLQLHKKTHTY
Download sequence
Identical sequences XP_017453259.1.100692

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