SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017453593.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017453593.1.100692
Domain Number 1 Region: 718-792,835-1049
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 3.37e-80
Family Protein kinases, catalytic subunit 0.00000000253
Further Details:      
 
Domain Number 2 Region: 128-299
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 4.25e-73
Family Ephrin receptor ligand binding domain 0.00000135
Further Details:      
 
Domain Number 3 Region: 425-629
Classification Level Classification E-value
Superfamily Fibronectin type III 2.76e-33
Family Fibronectin type III 0.00021
Further Details:      
 
Domain Number 4 Region: 1053-1107
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000000000269
Family SAM (sterile alpha motif) domain 0.00066
Further Details:      
 
Domain Number 5 Region: 354-417,463-476
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000824
Family Growth factor receptor domain 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017453593.1.100692
Sequence length 1111
Comment PREDICTED: ephrin type-A receptor 6 isoform X1 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MQFPSPPAARSSPAAQAASSPQAAAPAPGQPGPSCPAHGASRGGRPGTSPADRVEEEEEE
EEEEGLVQDPHPTRNTWLRCCGHFFLRRRREPARAMGGCEVREFLLQFGFFLPLLTAWTG
DCSHVSNQVVLLDTTTVMGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNW
LRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYIESDESHGTKFKPSQYI
KIDTIAADESFTQMDLGDRILKLNTEVREVGPIERKGFYLAFQDIGACIALVSVRVFYKK
CPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICT
TGYEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSSTFVEATSVCHCEKGYFRAEKDPPSM
ACTRPPSAPRNVAFNINETALILEWSPPSDTGGRKDLTYSVICKKCGVDASQCEDCGAGL
RFIPRPTGLINNSVVVLDFVSHVNYTFEIEAMNGVSELSISPKPFTAITVTTDQDAPSLI
GMMRKDWASQNSLALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLK
PATTYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILT
LFFLITGRCQWYIKAKMKSEEKRRTHLQNSHLRFPGIKTYIDPDTYEDPSLAVHEFAKEI
DPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQ
FDHPNIIRLEGVVTKRSFPAIGVEAFCPSFLRAGFLNGIQAPHPVTAGGSLPPRIPAGRP
VMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV
NSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVM
WEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPPSLHQLMLHCWQKERNHRPKFTDI
VSFLDKLIRNPSALHTLVEDILVMPESPGDVPEYPLFVTVGDWLDSIKMGQYKSNFMAAG
FTTFDLISRMSIDDIRRIGVILIGHQRXXXE
Download sequence
Identical sequences XP_017453593.1.100692

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]