SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017477824.1.95384 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017477824.1.95384
Domain Number 1 Region: 969-1188
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 6.02e-56
Family DBL homology domain (DH-domain) 0.00018
Further Details:      
 
Domain Number 2 Region: 71-189
Classification Level Classification E-value
Superfamily BRCT domain 3.2e-18
Family DNA-repair protein XRCC1 0.043
Further Details:      
 
Domain Number 3 Region: 207-260
Classification Level Classification E-value
Superfamily BRCT domain 0.000000233
Family DNA-repair protein XRCC1 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017477824.1.95384
Sequence length 1376
Comment PREDICTED: protein ECT2 isoform X2 [Rhagoletis zephyria]; AA=GCF_001687245.1; RF=representative genome; TAX=28612; STAX=28612; NAME=Rhagoletis zephyria; AL=Scaffold; RT=Major
Sequence
METIDEQSKSEMSISPSPSPENLRICLVGDVVNDAETVEAARCFNVPVITSENGLDVLND
YEWRTYFVLKDFEGPIYDAIHKNKQCILGPPALKHAAESKDGLIRNARPIYNYSMRGVVT
CFTGIRKKDELTRLVNLIHSMGGCIRKDMNSKITHLICSHSGGDKYQYAKTFRLTVVRPA
WVYAAWERRDELQFRATTDDFSREHKLKAFEGQKICFFGFPADEHQHMVDVLISNGGVPA
ELDDPECSHVVMPNTGGYFLEAITNTCNSPKPQPITNLHPNPDPTNPRPAPACATSGSQE
LKGVNVEATAAVAEMPQNEIIEKIEEKTAKPNETETETFPEADECQMDVESPHLTSNKNE
FVKDDENVDADDDGDYFDERLVVDYDRNKELQCGSPLPEGVDIDDPDDYAPPARQLSANT
PLKQPNLPLQESKSPQYDINSNSSKAKVEESKPLPPNPIDENASTPIKVANTDADAGEHS
SKNTTDGAILTKEADNAFHNPNNISPILSVRQEAEASQARSSSSIKIPKLVITTNSSPEN
EPLPMETDTDVVLADEEDFGDLNELKRKRESFDSISLMSVESFALPNSTKKPKLIRAGSI
TRSIRRSMSFVAVRTPISKMMRPRRSSVALDSAPNGEEGGCNVDDSFCSIASMETTFNES
ICKPVKEKFRSLRDRITRSSSKKDKYNVNTLQPTTTPEKDEKCERELPSSGFKTPKAPTK
FLSAAARAIGTPKSLTKIVLSAPSPSPQSTASPKQCAEINSAAAVSIPATYIPTTPTPFP
VPALRSSPIRSSNQPINSEIIHQESPFQVHAHCQAVQNQRTALPQQRENLLKNAGGCSSM
VVDEHTTQTKPDPKNHRTHILKSDWFWYTIQNGYADEMDYLFGDYLDSIANTPNTDRRDS
LPISFNKRKRKRFSQRIQFEGTPMGSGKRRSSVSDAGLLSVSGSFFDCTTSPDKLEAGKL
HNEVRIETPTVTETTPAKKSMRFNHFMDFFSTESNYVGILDTIVKLFKNPLEEIAETSDE
LLNKSEIKSIFNNFLPIHEVHQSMLESLRAIQSKWSEDCLIGEIILQHRDELTKAYPPYV
NFFEQMKETLQQCDSQNPRFHAFLKINQTKPECGRQSLQDLMIRPVQRLPSISLLLNDIL
KHTNKNNPDYAKLEQALKAIKEVMMHINEDKRKTESRMAIFDIFNDIEGCPPHLVSSNRS
FISKCEVTELSDSLSGRGDSLMLYLFSDTIEVCKKRSRAFNTAKSPSTTKSHKHVKLISL
NAIRFVIDITDSPRAFALLCRQDKEKLHSFTLADEEIDKVVYLKVLCKQMAENACRTDTV
SALLSRTSQELEVDISDVNLSTLSKAFKLAARTRQKKIFTLLRWVAHFHSTRLPPN
Download sequence
Identical sequences XP_017477824.1.95384

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]