SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017898896.1.57651 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017898896.1.57651
Domain Number 1 Region: 883-1063
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.03e-38
Family Laminin G-like module 0.001
Further Details:      
 
Domain Number 2 Region: 473-677
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.03e-34
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 3 Region: 689-879
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.35e-34
Family Laminin G-like module 0.0059
Further Details:      
 
Domain Number 4 Region: 286-454
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.33e-33
Family Laminin G-like module 0.0034
Further Details:      
 
Domain Number 5 Region: 26-181
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.96e-29
Family Laminin G-like module 0.005
Further Details:      
 
Domain Number 6 Region: 1096-1236,1265-1307
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.39e-29
Family Laminin G-like module 0.000000908
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017898896.1.57651
Sequence length 1509
Comment PREDICTED: neurexin-2-beta isoform X10 [Capra hircus]; AA=GCF_001704415.1; RF=representative genome; TAX=9925; STAX=9925; NAME=Capra hircus; breed=San Clemente; AL=Chromosome; RT=Major
Sequence
MAPGNRWRPPSLPLLLLLTLVAGAGGLEFGGGPGQWARYARWAGAASSGELSFSLRTNAT
RALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRDAR
RTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLANL
KLGERPPALLGSQGLRGAAADPLCAPARNPCANGGLCTVLAPGEVGCDCSHTGFGGKFCS
EEEHPMEGPAHLTLNSEVGSLLFSEGGAGRGGAGDVHQSSKGKEEFVATFKGNEFFCYDL
SHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVE
PVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYI
GGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEGDPKMKLQGDLSFRCEDV
AALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGVGPGSPSTAQ
RADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRST
PFLATGESEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRD
LRGLAEAQGAVGVAPFCSRETLKQCASAPCRNGGACREGWNRFVCDCIGTGFLGRVCERE
ATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQ
MKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA
GAHTRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYCELNAR
FGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIE
LVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNG
ARNLDLKGELYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQV
ERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPICNDPGTTYIFGKGGALIT
YTWPPNDRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHIDQGTVGVIFNVGTD
DITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNFDNERLAIARQRIPY
RLGRVVDEWLLDKGRQLTIFNSQAAIKIGGRDQGRPFQGQVSGLYYNGLKVLALAAESDP
NVRTEGHLRLVGEGPSVLLSAETTATTLLADMATTIMETTTTMATTTTRRGRSPTLRDST
AQNTDDLLVASAECPSDDEDLEECEPSTANPTGPGERGPPGAVEVIRESSSTTGMVVGIV
AAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSAQSNGAVVKEKAPAAPKTPSKAK
KNKDKEYYV
Download sequence
Identical sequences XP_017898896.1.57651

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]