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Domain assignment for XP_018057460.1.4000 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018057460.1.4000
Domain Number 1 Region: 487-769
Classification Level Classification E-value
Superfamily ARM repeat 2.85e-25
Family Armadillo repeat 0.015
Further Details:      
 
Domain Number 2 Region: 771-848
Classification Level Classification E-value
Superfamily SAM/Pointed domain 3.44e-16
Family SAM (sterile alpha motif) domain 0.028
Further Details:      
 
Domain Number 3 Region: 923-1064
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.0000000000000994
Family Toll/Interleukin receptor TIR domain 0.0064
Further Details:      
 
Domain Number 4 Region: 850-919
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.00000000554
Family SAM (sterile alpha motif) domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_018057460.1.4000
Sequence length 1128
Comment PREDICTED: sterile alpha and TIR motif-containing protein 1 isoform X3 [Atta colombica]; AA=GCF_001594045.1; RF=representative genome; TAX=520822; STAX=520822; NAME=Atta colombica; AL=Scaffold; RT=Major
Sequence
MTMVVNKINMSSYSMPRRTFFSGLHTKMSEFPVEGGENMHTAMENFQKKNLVTGRTHHVT
HHPQVTTTSSQMLTTNQSQHQSSSSTSTSTSSSSSSSSTSSRVAKSSQRILTSSSSSEMK
ASSMKSDLTELKRGISEMKNISTNFSQRLRNSMENLVDRDGSGSEETDLTEPLVTFPDTD
TPPPVNDAVTLAGGSPSQLSSLNSLNNLHHSMSPPMNIPSMPNLPAGQETMKFEQKKMTS
ASKTKVVTDGFSAEKATANSAEMRALQAGDVSYKEQSAATAARARVELDGVSAEKSVAAA
REQRSLKAGDLSHQESNNMAASTMKLQSDSFTSEKKAMAAQQQRQTVTSTGIFNHEKHIA
SSSQSSITIASKSGVSSSKSMISAASAVNQLMNGMRPPTAEDELLSLPLDDLDLLCSKSN
PQDVDCAIAKYCSLLDSFVERLKVSADSGKSSNSGSKAPQLLNRVNEIIRKAWAVPTHGH
ELGYTLCNTLRTRGGLDLLMSNCIANDHELQFSSARLLEQCLTTENRAHVVENGLEKVVN
VACVCTKNANSVDHARVGTGILEHLFKHSEGTCSDVIRLGGLDAVLFECRKNDVETLRHC
AGALANLSLYGGAENQEAMIKRKVPMWLFPLAFHNDDNIKYYACLAIAVLVANKEIEAAV
LKSGTLDLVEPFVTSHNPYEFAKSNLAHAHGQSKNWLERLVPVLSSKREEARNLAAFHFC
MEAGIKKQQGNTDIFRTIGAIEPLKKVASCPNAIASKYAAQALRLIGEEIPHKLSQQVPL
WSTEDVREWVKQIGFAEVAPNFVESRVDGDLLLQLTEENLREDIGLTNGIMRRRFARELQ
NLKKMADYSSRDTGNLNSFLQSIGQEFSIYTYSMLNAGVDKDSIRNLSEDQLLAECGITN
SIHRLRILDAIKNMQHNQFSSCEYESPDKSLDVFVSYRRSNGSQLASLLKVHLQLRGFTV
FIDVERLEAGKFDNNLLQSIRQAKHFLLVLTPQALERCIQDSECKDWVHREIVAALQSQC
NIIPIIDNFQWPEPEELPEDMRAVCHFNGVRWIHDYQDACVDKLERFMRGEIPMRSDLSS
GIPRSMAPKDVTQPSTPANANMRQPPNYQRMHSNESRGSDKDSTGGRD
Download sequence
Identical sequences XP_018057460.1.4000

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