SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_018357243.1.14990 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_018357243.1.14990
Domain Number 1 Region: 149-285
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 3.66e-19
Family Toll/Interleukin receptor TIR domain 0.0015
Further Details:      
 
Domain Number 2 Region: 15-101
Classification Level Classification E-value
Superfamily DEATH domain 0.00000000000706
Family DEATH domain, DD 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_018357243.1.14990
Sequence length 430
Comment PREDICTED: myeloid differentiation primary response protein MyD88 isoform X2 [Trachymyrmex septentrionalis]; AA=GCF_001594115.1; RF=representative genome; TAX=34720; STAX=34720; NAME=Trachymyrmex septentrionalis; AL=Scaffold; RT=Major
Sequence
MTIDLSTVPLVAVTVASRQVIATMLNPVKVLPSDNGLPRDWRGLAHQLEFSSKFVSMLVS
HSDPTMRIFTELTDKNKKDFTIKDFQTMMEQMDRWDVIDDTEALFQSDAERYLEYQQRAQ
MSADPMDECTDKKILTLDDIHRLKQGLASQYYDAFLLYAEEDIVFVKEMIEKLEIQFKLK
LCLKDRDLVAGLEFEHEAVMELISERCNRLLIIVSPNLMKHSANKFFLNYTQALSIEKRQ
RKIIPCIYKSCELPFQLKYIFNLDYNRKGLFDFWGRLRDSIQTSNSTATSSTQIGNSSIM
QETTEIKKTFSDKYIDEPYITQKTNEALKFPQQKSENCKDEVIAKAISDIETLNVNNKKN
KTLLRWEKITSNLKMKQTKKSDQLTTEAIVQNLPSVDNLDSLDLSSTHVYKKKKKNLFSK
FTKKKIPMKT
Download sequence
Identical sequences XP_018357243.1.14990

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]