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Domain assignment for XP_018531719.1.34915 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018531719.1.34915
Domain Number 1 Region: 344-480
Classification Level Classification E-value
Superfamily C-type lectin-like 8.27e-42
Family C-type lectin domain 0.00045
Further Details:      
 
Domain Number 2 Region: 637-779
Classification Level Classification E-value
Superfamily C-type lectin-like 1.82e-35
Family C-type lectin domain 0.0000653
Further Details:      
 
Domain Number 3 Region: 788-915
Classification Level Classification E-value
Superfamily C-type lectin-like 8.22e-34
Family C-type lectin domain 0.00082
Further Details:      
 
Domain Number 4 Region: 493-623
Classification Level Classification E-value
Superfamily C-type lectin-like 9.79e-32
Family C-type lectin domain 0.001
Further Details:      
 
Domain Number 5 Region: 1235-1363
Classification Level Classification E-value
Superfamily C-type lectin-like 7.93e-31
Family C-type lectin domain 0.0016
Further Details:      
 
Domain Number 6 Region: 918-1074
Classification Level Classification E-value
Superfamily C-type lectin-like 1.21e-28
Family C-type lectin domain 0.0016
Further Details:      
 
Domain Number 7 Region: 212-345
Classification Level Classification E-value
Superfamily C-type lectin-like 3.48e-27
Family C-type lectin domain 0.0015
Further Details:      
 
Domain Number 8 Region: 1086-1214
Classification Level Classification E-value
Superfamily C-type lectin-like 5.47e-27
Family C-type lectin domain 0.0023
Further Details:      
 
Domain Number 9 Region: 150-207
Classification Level Classification E-value
Superfamily Kringle-like 0.000000000000018
Family Fibronectin type II module 0.0031
Further Details:      
 
Domain Number 10 Region: 30-151
Classification Level Classification E-value
Superfamily Ricin B-like lectins 0.000000000000382
Family Cysteine rich domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_018531719.1.34915
Sequence length 1454
Comment PREDICTED: macrophage mannose receptor 1-like isoform X2 [Lates calcarifer]; AA=GCF_001640805.1; RF=representative genome; TAX=8187; STAX=8187; NAME=Lates calcarifer; AL=Scaffold; RT=Major
Sequence
MRNFRKMQTIKITWAAFVLLIQTLQCLASDDSSFELTNKATGFCLVNTHGFCTSVRWTTG
DRLMVDFWNVYKCLGAQGKSVGSGVTLYDCDEKSELQKWECRNGTLLALKGQELYIEITT
DNTAVLSRTTGPNNHLTIQGTSVGACTRTYREFYTIGGNAHGRTCMFPFLYKDKWYEDCT
TFDSSTARPWCAVETKFEHELWGYCPTNSKEHWKKHITTGVYYQLNIQSALTWTEAEASC
KQQSASLLSITDPHEQAYVSALLAAEGRGQGDKLWSGLAMDQEHGWQWSNGQPYRYLNWD
SGHPLGKPGHSCGIIDGDVQYSWQSSTCTKKLGYICNSDGTVAPPTEAAETGFCSAPWIP
YNGHCFHLNRTKKTWSDAQRACHMEGGDLVSIRNVEDQGFVISQLGYGSTDELWIGLNDR
RTEKLFDWSDHSTVSFTSWAYGEPSLSADAEDCVLINGENGNWADRVCNEKHGFICMKTS
ASEPSGGEVDQNVGCKTGWKRHGSYCYFVGTATKTFDEAKEDCKSSDSYLADVSTGVDNA
FLVSLVGLRPEKYFWIGLSNQRDIDQFVWTNTDTVRFTHWNTGMPGHNQGCVAMTTGILA
GLWDVLPCTNREKYICKHQAEGAVLTPAPPTVSPPKCADGWTELGSRHYCYKFFQESSSK
KRTWYEARDYCRAIGGDLLSIHSAVEQRMLPDRYGTAWIGLSAPDPVTGYVWSDRSPVNF
QHWSSGEPNNQNNAESCAEFIGHKRDWSGSWNDEQCEKYNGWLCQIRAGKTPKPPPDPVK
PNYNETSDGWLEWNGNQYYINTRRMAMEAARHFCKQKHGDLVTIDSDAESVFLWKQISKL
YGSFWIGLTVDLDGSFSWMDGSQVVFQKWYEGQPDFKNYDENCVVMEQYTGFWHDYNCGF
EHRSICKRNGSPPANTTVAPTVPPKGGCLPHWKKINSKCYSIINNQKLTWDGARKQCQGM
GGNLASIPSRHVNAFLTSEMAAAPTTDLWIGLHSFHQGKFLWTDGRQRSYVNMDFKMLLR
GYRPMHFRRFREHFSFYDHLQEDKCVVINTNPLLGIGKWIPKSCNDTNGFICLRNVDPAF
PDSPEPTVPTNYVKMVNDSIKVVTQPMTWNDAKKYCEHDSANLASLRNDWSQVYIELMAL
NLKAPLWIGLNKVQTNGYFRFIDGWQMRFTRWGRNEPSRDRPCVYVDNDGKWKTAYCNET
MNSVCMKSTDVPPTESSLYPGICPEDPSSLSPNQNYFWQPFKGYCYIFFTEELRWSDAAA
SCARHGGSLASIEDPSEQEFIESNVGIYKDSHSSFWLGLYKSHKEEWLWLDRTVMDYTNW
EEGEPDSETHGAITTSDGKWKTGTYWYRKPYICKTAKVLPPTPSPSVKVGISHHQRSYII
VAVVLTIAGITVVAMIALFLLNKSGRHLPIPDKLTTFDNPLFFSNEQSPPDVVDTGNSTG
MNAEEENPEPVKTM
Download sequence
Identical sequences XP_018531719.1.34915

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