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Domain assignment for XP_018552625.1.34915 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018552625.1.34915
Domain Number 1 Region: 497-710
Classification Level Classification E-value
Superfamily TPR-like 1.71e-38
Family Tetratricopeptide repeat (TPR) 0.0041
Further Details:      
 
Domain Number 2 Region: 68-173
Classification Level Classification E-value
Superfamily TPR-like 7.38e-31
Family Tetratricopeptide repeat (TPR) 0.00086
Further Details:      
 
Domain Number 3 Region: 313-511
Classification Level Classification E-value
Superfamily TPR-like 1.64e-30
Family Tetratricopeptide repeat (TPR) 0.0086
Further Details:      
 
Domain Number 4 Region: 713-914
Classification Level Classification E-value
Superfamily TPR-like 9.7e-30
Family Tetratricopeptide repeat (TPR) 0.0062
Further Details:      
 
Domain Number 5 Region: 917-1107
Classification Level Classification E-value
Superfamily TPR-like 4.93e-28
Family Tetratricopeptide repeat (TPR) 0.012
Further Details:      
 
Domain Number 6 Region: 242-348
Classification Level Classification E-value
Superfamily TPR-like 0.000000000000675
Family Tetratricopeptide repeat (TPR) 0.028
Further Details:      
 
Domain Number 7 Region: 1083-1196
Classification Level Classification E-value
Superfamily TPR-like 0.0000019
Family Tetratricopeptide repeat (TPR) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_018552625.1.34915
Sequence length 2571
Comment PREDICTED: tetratricopeptide repeat protein 28-like isoform X2 [Lates calcarifer]; AA=GCF_001640805.1; RF=representative genome; TAX=8187; STAX=8187; NAME=Lates calcarifer; AL=Scaffold; RT=Major
Sequence
MEKHRTRKEKFSLFGSRSTSRTTNPPSSSSSSSSPVIPSAPTLKRAERPPAYTPPGLSKA
EFLERVRRSNQACQQGEYALAVCLYTEALTADPQNCILYSNRSAAYLRLGQYSTALDDAI
KARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLR
DSLEPTYQQLQRMKLDKSPFVVVSVIGQELLTHGFHGASVVVLEAGLKIGTCSLKLRGSV
FSALSSAYWSLGNAEKSMAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSKGSYREALAN
HRNQLVLAMKLKDREAASDALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQ
LGNMGAVYTALGDFTNAVQCHEQHLEIAKTLENRREEARAYSNLGSAYHSQRDFDKAISY
HTRVLELAQEQSDRAIEMRAYAGLGHAARCMQDLDRARQYHQHQLEIAQELQDRAAQGRA
SSNLGIIHQMKGEYEAALKLHKSHLSFAQELGDYAAQGRAYGNMGNAYHALGIYDQAVRY
HRQELQISLEVNDRPSQASTHGNLAVAYQALGAHDRALQHYLHHLTIARELRDTQSEARA
LANLGNFHSWRGEYAQALPYYQQYLTLAPGLQDLEGEGKVCHNLGYAHYCLGQYRDAVRY
YEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYNKAEECQRYLLSLAQALDNTQAVFRA
FGNLGDVCVCRGDLPGAVRFYQQQLTLAQKVSDQKMEADAFSALGSVHRLLRQLDTALSF
HSQELTVRKDLGDQQGECRALGHLAAVHMALGDYATTFQCYETQLGLAQGLRDARLEAQV
HGNMGITKMNMGVFEEAIGYFEQQLAMLQQLSGTESMLDRGRAYGNLADCYDALGDYEEA
IQYYEKYLTVAQSLNHVQDQEKAYRGLGNAHRSMGSLQQALVCFEKRLVVAHELGGEGGG
KAQAYGELGTLHSQLGNYEQALSCLEHQLNIARTAGDKSLEAEASDALGGVYQLMADNET
ALQWHQRALDIAEQTRCVRSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLIA
KTLAYGSLGRIHHALQNYAQAVMYLQEGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEE
AQHQLYRASVLFETIRHETQHSTDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERG
RTRAFADLLVERQKGSQQAASTDPYIPVTVEHILETVNGQRAMVLYYSLAGGFLYSWLIS
PGTGIVKFSEVYLGETGAEMSEFQDGGGSPQGGGGGGGGGGGGGPLSLEQYICNAREALG
VDSHYSRGCSSSETESEAGDLLEQQFEELNNKLTSAADPTGYLRMVSRNNLFNRSSQSMT
SLYSATVSPVKDNLSSPPCRPSNISKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLV
LEGELYLIPFALLKGSSSNEYLYERFSLISVPSLASLGATVKPPSRRVGPSLCTDGGSVA
AVVGAPRLPSSVMDRWLWGPLPSAQDEALWLGEQLGCHPLTGANATKERVLAALSQAECI
HFATHISWKLAALVLAPGPEHAGGEGAGSRPKEKSPCGASTSGEAVDQDGKVKGSFSKSH
SSPERLRGADETSEDAESVCEVESVCDSPPLQDFLLTAADILGLCLTVKVVVLRLYPESS
SRVSADGVVGLTRAFLAAGVQCVCVSLWPVPIAASKLFTHTFYTALLNGTKASAALTEAM
KTLQSSKHFSHPSNWAGYMLIGNDVKLNSPMSLVGQALAEILQYPERARDALRVLLHLVE
KSLQRIQSGQCNPMYTSQQSVENKVGGVPGWQALLSAVGFRLDFSGSGAGLPAAVFFPTS
DPGDRLQQCSTTLQSLLGLTPPALQALCKLVTASEAGEQLIHKLHQVLVQLQSGDKEQDF
SLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRTMHFALQSLLA
LFDSTELPKRLSMDSSSSLESLSSSQSASQPHSLPISFGCYPPQPSFLPPVCPDNLSCDA
ISVYSLSSLASSLSFLSRPEPAGSDIISQRSHQQEPDRSRGGAGLYGSHRHSGGGLLRGR
LTNHGGAAGEGEDEEYEGYSIISSEPLGRGGRDCDTLPLPAGHRHGRGGAGRGANGGHGY
PITISSKGSVSTPTSPIKAPPLPLTVSPSPKLRQEISSPQRTGKGKVSSSESDQSSTETD
STVKSQEERTGPAGQMDPQELAQKILEETQSHMQAVESLQKANIRGKTLRGSEGREEAQA
RQPSLSTPTTPTLTPSGGARGFQPSETSAFSRPPSRASLKACSSPLSLSSHLSPLSASVS
TPPPTRPKPPSRSSSLQKISSGYNSPAHSSPSLSLSVKEQGSPFSTASPDVHAQAELKLK
YPTSPYTAHISPSRSPADSAPSPALSYSSTGSVSASSSPANTPELNQSKQDNKVQAIHNL
KTFWANASQKHEVPCPASLLRGGNKKMSTVQKDVLGLLNLSPRHESLSKNVEAPEDQKSS
SRTNGHQKLEAKPPPPPPPNAPTNSKGGIRLPSGNGYKFLSPGHFFPSSKC
Download sequence
Identical sequences XP_018552625.1.34915

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