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Domain assignment for XP_019222546.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019222546.1.78416
Domain Number 1 Region: 645-827
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.33e-40
Family Laminin G-like module 0.0021
Further Details:      
 
Domain Number 2 Region: 427-633
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.78e-38
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 3 Region: 219-410
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.17e-36
Family Laminin G-like module 0.0026
Further Details:      
 
Domain Number 4 Region: 831-1011
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.4e-36
Family Laminin G-like module 0.0025
Further Details:      
 
Domain Number 5 Region: 1044-1227
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.44e-33
Family Laminin G-like module 0.000000921
Further Details:      
 
Domain Number 6 Region: 23-191
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.51e-31
Family Laminin G-like module 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_019222546.1.78416
Sequence length 1425
Comment PREDICTED: neurexin-1 isoform X24 [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MISPKPHVAHIIWVGLLICCFVEIGTCLEFTGAEGQWARFPVWNACCESEMSFNMKTRSS
HGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVVSDTAVNDSQWHTVTIRRNFK
NTTLMVDNEIKWVEVKSKRRDMTVFSHLFVGGIPPELRSVALRLTSAAVKDQLPFTGWIT
DIKVNNTESVMINSEGVLNDLCGTANMCLNGGVCSLINNEPTCDCSRTGFQGKDCSEGKE
EYVATFKGSEFFCYDLSLNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAV
SLVINLGSGAFEALVEPVNGKFNDNDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGY
TQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDVRLELSRLAKQGD
PKMKIHGTVAFKCENVATLDPITFETPESYIILNKWNAKKTGSISFDFRTTEPNGLLLFS
HGKLKQQPKDSKSPQTLKVDFFAIEMLDGHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVD
FQRDGRSGTISINTLRTAYTAPGESEILDLDDNLYLGGLPENRRGLVFPTEVWTALLNYG
YVGCIRDLFIDGQSKDVRRLAEIQRAAGVKPSCSKEPPKQCLSNPCQNNGICREGWNRYV
CDCSGTGYLGRSCEREATILSYDGSKFMKVQLPVVMHTEAEDVSLRFRSQRAYGILIATT
SRDSADALRIELESGRVRLTVNLGKGPETIFAGQNLNDNEWHTVRVFRRGKNLKLTVDDL
PPVEGQMAGDHTQLEFHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDI
DYCELNAMIGFKNIIADPVTFKSRSSYVTLTTLQAYYSMHLFFQFKTTSSDGLILYNSGD
GNDFIVVELVKGYLHYVSDLGNGAHLIKGNSNKPLNDNHWHNVIISRDTNNLHTVKIDTK
ITTQTTTGAKNLDLKGNLYIGGVAKEMYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSD
ALDCVGQIERGCEGPSTTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIF
GRDGGLITYTWPPNDRPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIDKGNIA
VVFNVGTDDINIEETSKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGRQLTIFNS
QTTIQIGGWERDRSRSFQGQLSGLYYNGLKVFNMAAEGDPNIRIQGSVRLVGESPSSITP
QSSTTANRSETSTSIMEITTTTASSRRVKPTTSREPPQTTDEFPVASAECPSDDEDIDPC
EPSSANPTGAGPKGYPGTQEVFRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGS
YHVDESRNYISNSAQSNGTVVKEKQVNTAKTSSKNKKNKDKEYYV
Download sequence
Identical sequences XP_019222546.1.78416

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