SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_019505392.1.44202 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_019505392.1.44202
Domain Number 1 Region: 229-381
Classification Level Classification E-value
Superfamily Ribonuclease H-like 8.1e-28
Family DnaQ-like 3'-5' exonuclease 0.00096
Further Details:      
 
Domain Number 2 Region: 504-660
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000137
Family Canonical RBD 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019505392.1.44202
Sequence length 774
Comment PREDICTED: putative RNA exonuclease NEF-sp isoform X2 [Hipposideros armiger]; AA=GCF_001890085.1; RF=representative genome; TAX=186990; STAX=186990; NAME=Hipposideros armiger; AL=Scaffold; RT=Major
Sequence
MEPEQGETERRPKRVRKRRQAPSELGGAAEAMRAGWQRAARLPLVKKPRLSTILFTENCE
VTHDQLCELLKYAILGKSSVPKPSWCQLFHQNYLNNVVIFVLQGMSQLHFYKFYLEFGYL
RKAFRHKFRLPSPSSDFLAEITGLQKKEATGDLSTTSTESLPSVSSNVSVNLQNDPIIQK
YGSKKVGVTKCLLTKEEMEKFQFPLQGFPDCEDFVPTKCNGSVTDSSPLFGLDCEMCLTS
KGRELTRVALVAEGGGCVMDELVKPDNKILDYLTSFSGITKQSLDPVTTKLKDVQKKLKA
LLPASAVLVGHSLDLDLKALRMVHPYVIDTSLLYVREQGRRFKLKFLAKAILGKDIQNPN
RLGHDATEDARTALELAQYFLKYGPKKVAELNLEAIVNRQELQAADQELSGTAGTQQPNA
SVLDCLHSAGQKLLLLTREAETSKLSSSGNCQTVTCLSNKEVLEQARVEMPLFPFSIVQF
SFERLSPALAEEMNQRLIIKWTEMSTVYAGPFSKTCNVAAVKTLFKSFGPVHSIALILET
HQPHFRVQYEVLEAAQLAIESLNGAVVEGGRIQVQRPVTELTLDCDTLLNELEEDAENRG
AIYLSGVSEAFREHLLQQSSLFVGLEAVILPKDFKTGKQRSYCFLKFKTFCSAQSALKIF
RSNEWKLKGRHALTPRHFYTWLQSLPPESRRSPGLQLESPSLEQQALQILNMDHPKITAW
RWGRKIGKLYHSLGPGTLCLILLPGTKSTHGSLPGLGLMGIKSEEERVIPDTCL
Download sequence
Identical sequences XP_019505392.1.44202

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]