SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_019510083.1.44202 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019510083.1.44202
Domain Number 1 Region: 56-175
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.36e-24
Family Spermadhesin, CUB domain 0.00061
Further Details:      
 
Domain Number 2 Region: 270-384
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000353
Family Spermadhesin, CUB domain 0.0036
Further Details:      
 
Domain Number 3 Region: 473-510
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000497
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 4 Region: 183-220
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 5 Region: 229-268
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000124
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 6 Region: 434-471
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000249
Family LDL receptor-like module 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019510083.1.44202
Sequence length 788
Comment PREDICTED: low-density lipoprotein receptor-related protein 3 isoform X3 [Hipposideros armiger]; AA=GCF_001890085.1; RF=representative genome; TAX=186990; STAX=186990; NAME=Hipposideros armiger; AL=Scaffold; RT=Major
Sequence
MTGWAQRFLGGVRFQRPLRGVSNLPSQALLGTEASISVNIVLSGRLSSAVPALAACSGKL
EQHTERRGVIYSPAWPLNYPPGTNCSWYIQGDRGDMITISPVHPCSFRNFDVEESHQCSL
DWLMLGPAAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKL
GQASCQSDEFRCDNGKCLPGPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSG
ARSTRCLPAERRCDGTQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSDLH
CTWLVDTQDPRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQG
RLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCGSSSEGDMSDTGEQGCFSEPQRCDGW
WHCASGRDEQGCPACPPDQYPCEGGSGLCYTPADRCNNQKSCPDGADEKNCFSCQPGTFH
CGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVPRKVITAALIGSLVCGLLLVIALGCAFK
LYSLRTQEYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYSASQASVLQN
LRTAMRRQMRRHASRRGPSRRRLGRLWNRLFHRPRAPRGQIPLLTAARTSQTVLGDGLLQ
PATGAAPDPQAPLTDTGSPGAAGDGSPSAPGHTPEVGPSMPPSSGLRDPEYRPVDKDRKA
CRDPLVDSPAPVDMLQEACSAQDPHPMTPTASNTLGPHPPEPLGVCRSPQLPCSPTLEAS
DDEALLVC
Download sequence
Identical sequences XP_019510083.1.44202

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