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Domain assignment for XP_019737894.1.30352 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019737894.1.30352
Domain Number 1 Region: 855-1031
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.83e-39
Family Ypt/Rab-GAP domain of gyp1p 0.0034
Further Details:      
 
Domain Number 2 Region: 1006-1121
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 6.28e-31
Family Ypt/Rab-GAP domain of gyp1p 0.0047
Further Details:      
 
Domain Number 3 Region: 169-215,339-425
Classification Level Classification E-value
Superfamily PH domain-like 1.95e-25
Family Phosphotyrosine-binding domain (PTB) 0.013
Further Details:      
 
Domain Number 4 Region: 18-164
Classification Level Classification E-value
Superfamily PH domain-like 8.88e-20
Family Phosphotyrosine-binding domain (PTB) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_019737894.1.30352
Sequence length 1258
Comment PREDICTED: TBC1 domain family member 4 isoform X2 [Hippocampus comes]; AA=GCF_001891065.1; RF=representative genome; TAX=109280; STAX=109280; NAME=Hippocampus comes; AL=Scaffold; RT=Major
Sequence
MSQLSSMETPTGEDGSHIPEKRFPLMYIGWSVLDRRTSLPMLPWLVAEIRRRSERGDCGP
AMQPREVQLVLHSPFLRCVPCSSSSSSSSNNNYSVFIFEHKAQHISRFMHNSNDLTYFAY
LLRAHPDNPEAEMSCHVFKASDPNQVPEVISSIRQVSKSALKEDTKPKQENDEAFYNSQK
FEVLYCGKVTVGHKKAPSTLIDDCIDKFHQHEVKRKLLLNGQRGSVDKVPVEFTIGAGGD
PLSSALNEKNEDSKGLGGEDMTASGMSTTSGSQSSLRGAFPECILEDSGFQEPQEFRMRC
SSMAGRLQRTTSEGAGMDPARRRHASAPNHVQPSDSDKNRTMLFQVGRFEVNLISPDSKT
VVLEKNFKDISSCCQAIKQTDHFGFICRDYSESGPSQYVCFVFQCASESLVDEVMLTLKQ
AFSTAASLQSNKTLVQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLPDNEQVEI
FERVQRLKPSSDQEENELAILYLRQLCESKQKTHLHIGEAPQNASNSAGDGAATGSRFKL
DILKNKARSSLTSSLENILARGASRMRGRLGSMGSMSSFDKQDEEPTGVSPPASPPPFPD
DDPEASQQFRRRAHTFSHPPVKKRISFEGQTGNPAKQAPLRRQHSATLEALQSSPVVVSR
TRSVSESQSFSLPSSSSSSFSAPTFLKSIYQGSLGSLGSLSSLTDSGSIKSNGEGRKRTL
SGCSSDSVSGPSPCPRRVSWRQKIFLRVASPMGKTSMHPSDQSDNRELLPLSPRGPHSSV
DPLSGGGARPKRTGADYRTLWKTAVRQQILLLRMEKENQRLEESRDELHIRKMKLSYQEV
GPDSQELQALWEKKLTAPGRTTVRQDQEDLYRALCQGVPKSRRGEVWLLLCHQHRLCRRH
PQRQPANDTPYRDLLKQLTAQQHAILVDLGRTFPNLEYFSAQLGAGQLSLYNLLKAYSLL
DTEVGYCQGVSFVAGVLLLHMSEEQAFDMLKFLMYDLGIRRQYKPDMISLQIQMYQLSRL
LHDYHRDLYNHLEVYEISPSLYAAPWFLTLFASQFPLGFVSRIFDFLFVQGTEVIFKVAL
CLLSSHQGEIVECDSFESIVDYLKTTLPSLTQTQMEQTIAKVTEMDISKQLHAYEVEYHV
LQDEVGEGGATPDDSERLDKLEKTNVQLKKQNMELLEKLQAARQKIQTLETNVENFLSRE
SKMKHVIRTLEQERSAHQKTIERMRSCLPPDVLTDVEMTHIKAPAAPDAKAKAGAKKP
Download sequence
Identical sequences XP_019737894.1.30352

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