SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_019745101.1.30352 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_019745101.1.30352
Domain Number 1 Region: 151-250
Classification Level Classification E-value
Superfamily Ubiquitin-like 7.11e-32
Family Ras-binding domain, RBD 0.0027
Further Details:      
 
Domain Number 2 Region: 290-403
Classification Level Classification E-value
Superfamily PH domain-like 0.00000000000000728
Family Pleckstrin-homology domain (PH domain) 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019745101.1.30352
Sequence length 724
Comment PREDICTED: amyloid beta A4 precursor protein-binding family B member 1-interacting protein [Hippocampus comes]; AA=GCF_001891065.1; RF=representative genome; TAX=109280; STAX=109280; NAME=Hippocampus comes; AL=Scaffold; RT=Major
Sequence
MDDIDAMFSDLLGEMDLLTQSLGQEQAPPPSSPPEAEQEVNLSIGFTDLNASLNELEDND
LDALMADLVADLNATEEKLAAEIESLKEPQPEPLPPPSVGPPSSSPPLSSDSSTTFPSST
LPPPPPQSSKPTMEEIEAQIKADKIKLALEKLKEAKVKKLVVKVCMNDGSSKTLMVDERQ
NVREVLDNLCEKTHCDYNVDWSLCETNPELQLERTFEDHEHLVEPLLAWTRDSENQILFQ
ESSDKYEVFKNPQKFYLWKKDKKVLKDMKDKDKEILIKENFCGTSIMVPDLEGVLHLKED
GKKSWKPRLFQLRASGIYYVPKGKTKSSRDLVCFVQFDNVNVYYGKDFRAKHKAPSDFCF
VLKHPQIQKDSQYIKYLCCDDAWTMNLWVTGIRIAKYGSNLYENFKTAEKKAAVGSAWAS
CSVTSGQKQSQSQVANGHANNTSPSPLPPPPPPLGEDLPPPPPPPPQLGKTLPPAPPPLG
ATLPTPPPPPGGTPPPPPPPRRNPPPYPRHLPHISELYPLRRLLLLYQLPTVHSLVLLFQ
PNLPPNPSPNHDVQRPISRCLPGPQITFPPPPPPPVDDSPPDFLPPPPPAANFGSHPPPP
PPVKTLPPPPPHMKTLPPARLSFKSTNLPPPPPDPGFLPPPLTGVPPPPPPPPPPPPTTA
AAGPRRAPVRPSGSLKKMPPPPPKRSTPSLHGRRDGDRGDGDGGGGGDFMSELMRAMQKK
RDPH
Download sequence
Identical sequences XP_019745101.1.30352

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]