SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_019827182.1.53367 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019827182.1.53367
Domain Number 1 Region: 330-560
Classification Level Classification E-value
Superfamily L domain-like 7.82e-35
Family Ngr ectodomain-like 0.0018
Further Details:      
 
Domain Number 2 Region: 69-272
Classification Level Classification E-value
Superfamily L domain-like 1.02e-33
Family Ngr ectodomain-like 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_019827182.1.53367
Sequence length 842
Comment PREDICTED: SLIT and NTRK-like protein 6 [Bos indicus]; AA=GCF_000247795.1; RF=representative genome; TAX=9915; STAX=9915; NAME=Bos indicus; breed=Nelore; AL=Chromosome; RT=Major
Sequence
MKLWIHLLYSSLLACISSQSQSPMPSASARGSCDSLCNCEEKDGTMLINCEEKGIKKLSQ
ISVPPSRPFHLSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLH
INHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN
IFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCDLLQLKLWLENMPP
QSVIGDVVCNSPPFFKGSILSRLKKESICPTPPVYEEHEDPSGSLHLAVTSSISDSHMSA
KTTSLLKPPTKAPGLIPYITKPSTQLPGLYCPIPCNCKVLSPSGLLIHCQERNIESLSDL
KPPPQNPRKLILAGNIIHTLLKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYL
NGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHI
FSGVPLTRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKN
TVTDEILCTSPEHLHKKELKALNSELLCPGLVNNPSLPTQTSYIIVNTPTTTTTADNIFK
SLTDAVPLSVLILGLLIVFITIVFCAAGIVVLVLHRRRRYKKKQADEQMRDTSPVHLQYS
MYGHKTTHHTTERPTASLYEQHMVSPMVHVYRSPSFGPKHLEEEEERNEKEGSDAKHLQR
SLLERENHSPLTGSNMKYKTTDQSTEFLTFQDASSLYRNILEKERELQQLGITEYLRKNI
AQLQPDTEVHYPGAHEELKLMETLLYSRPRKVLVEQTKNEYFELKANLHAEPDYLEVLEQ
QT
Download sequence
Identical sequences F1MSM8
ENSBTAP00000005757 ENSBTAP00000005757 XP_005194244.1.59421 XP_005213943.1.76553 XP_019827182.1.53367

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