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Domain assignment for XP_019843269.1.53367 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019843269.1.53367
Domain Number 1 Region: 155-216
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 5.89e-25
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 2 Region: 384-440
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.07e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 845-901
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.66e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 440-496
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.25e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 5 Region: 732-789
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.36e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 6 Region: 789-845
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.1e-20
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 7 Region: 886-938
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.75e-19
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 8 Region: 348-397
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000104
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 9 Region: 695-746
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000126
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_019843269.1.53367
Sequence length 1012
Comment PREDICTED: zinc finger protein 316 [Bos indicus]; AA=GCF_000247795.1; RF=representative genome; TAX=9915; STAX=9915; NAME=Bos indicus; breed=Nelore; AL=Chromosome; RT=Major
Sequence
MRGGGASPSPSVFQAELRLLAEAMAAPRTTPDSPAAQLERLDGSECGPDQEEEEEEGKGD
QVEALEERLAEEVVVDADVEVDATVEAALAGEQSPASGTQECPHGGRDTESPGLQEKALQ
AFRAPATPRDEDLEREGEGDEEEEDEDEVDSLTSGSQGLVTFEDVAVYFSLEEWERLDXE
QRELYKEVMRENYGILVSLGYPVPKPDLIFRLEQGEEPWVPDSPRPEEGDIVTGVYTGAW
FWTDDIEDHEEDDDEDFLAEVAEEENEPPGLWSAAYGVGDVPGTWGPDDSDSAQTPEGWG
LDPGGLGVLAPGSESKPFLPDREPGASLLAPWAFPAAVAVPAGRPETTCDVCGKVFPHRS
RLAKHQRYHAAVKPFGCDECGKGFVYRSHLAIHQRTHTGEKPFPCPDCGKRFVYKSHLVT
HRRIHTGERPYRCAFCGAGFGRRSYLVTHQRTHTGERPYPCPHCGRSFSQSSALARHQAV
HTADRPHCCPDCGQAFRLRADFQRHRRGGGCAEPGSEGPRPEXXXXXRPAAGPEEAEVGP
EGLEGPEIDEADGETEGEAEVREAAVEAPTPRSKDDPEPDRRFLGLGNGLGEGEGPSSHP
LGFHFPMHPKSWLHPDGFPILGLPDFGERLPXXGRTLPGPLGGRLSLVEGAGLACDPFGG
GAGPGGASGLRAFGPAVGGLLAEPAPAALAEEESPWICSDCGKTFGRRAALAKHQRYHAG
ERPHRCADCGKSFVYGSHLARHRRTHTGERPFPCPECGARFARGSHLAAHVRGHTGEKPF
VCGVCGAGFSRRAHLTAHGRAHTGERPYACGECGRRFGQSAALTRHQWAHAEEKPHRCPD
CGKGFGHSSDFKRHRRTHTGEKPFRCTDCGRGFAQRSNLAKHRRGHTGERPFPCPECGKR
FSQRSVLVTHQRTHTGERXYACANCGRRFSQSSHLLTHMKTHRGAAGAPVQAPAAPVPKA
EAPAKGPPSAGTGTGPGEHGSTLLEFAGGTSFGSEPTAAFAGPSGAYEETIL
Download sequence
Identical sequences XP_019843269.1.53367

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