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Domain assignment for XP_019950691.1.63745 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019950691.1.63745
Domain Number 1 Region: 92-218,323-421,536-691
Classification Level Classification E-value
Superfamily L domain-like 9.16e-59
Family Ngr ectodomain-like 0.00079
Further Details:      
 
Domain Number 2 Region: 1152-1340
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.11e-43
Family Laminin G-like module 0.0036
Further Details:      
 
Domain Number 3 Region: 738-919
Classification Level Classification E-value
Superfamily L domain-like 4.47e-34
Family Ngr ectodomain-like 0.001
Further Details:      
 
Domain Number 4 Region: 927-967
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000699
Family EGF-type module 0.007
Further Details:      
 
Domain Number 5 Region: 1009-1052
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000247
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 6 Region: 969-1014
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000256
Family EGF-type module 0.006
Further Details:      
 
Domain Number 7 Region: 1087-1125
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000494
Family EGF-type module 0.011
Further Details:      
 
Domain Number 8 Region: 1050-1091
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000233
Family EGF-type module 0.014
Further Details:      
 
Domain Number 9 Region: 1338-1376
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000057
Family EGF-type module 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_019950691.1.63745
Sequence length 1535
Comment PREDICTED: slit homolog 1 protein isoform X3 [Paralichthys olivaceus]; AA=GCF_001970005.1; RF=representative genome; TAX=8255; STAX=8255; NAME=Paralichthys olivaceus; breed=gynogenesis; AL=Scaffold; RT=Major
Sequence
MPVRGCSFGADMGTRVGQPLWMWVVMLSALLIGNTSACPALCACSGTTVDCHGLGLKTMP
RNIPRNTERLELNGNNLTRVTKSDFAGLKYLRVLQLMENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCIEDGA
FRALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTI
GLFTQCTSPPELRGLNVAEVQKHEFSCSGHQESSSLQPCSTGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPDTMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYFIPGTEDTRLNNACNSDPVCPPKCRCETNVVDCSNLKLTKIPE
HIPASTTELRLNNNDITSLEATGVFKSLSQLKKINLSNNKITEIEDGTFEGASSVIELHL
TANQIDSVRSRMFRGLEGMRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGA
FDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPD
FRCEEGQEESSCVPKPQCPSECTCLETVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSVV
PKELSAFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSGLHSLRL
LSLHGNEVSELPDGIFSDVASLSHLAIGANPLHCDCHLRWLSDWVKTGYKEPGIARCAGP
QGMEGKLLLTTPAKKFECTGDVDTAVLAKCNPCLSSPCLNQGICHSDLVEIYRCSCPPGF
KGKNCETALNGCVSNPCSNGGTCRVNEDEEGRYSCTCPLGFEGPTCQTNIDDCEDNDCEN
GATCIDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSSGPKCVCSPGYV
GDDCSVDYNDCKEHRCQNGAQCVDELNGYSCVCPEGYSGQLCEASPSPLSLCELADCQNN
APCVERGGRALCQCPPEFGGPRCEKLVSVNFIDRDSYLLLSDLKNWPQANITLQVSTAED
NGILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTYDQMVN
LSIDGGLPTTMDSFGAVRPLNGEAPLYVGGMPVDVHSGAFRLWQLQNGSSFHGCIQNLYI
NNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGVQGPVCHCQPGWSGPHCDQPASN
PCQGSKCVHGHCIPLDTQSYRCECLEGYRGALCNQQGELFNPCRRLSCKHGRCQISDTGE
AFCHCESGYTGELCDAESECRGEPVRDFYQVQRGYAICQTTRVVSWVECTGACDTGACCA
SQRMKRRKYTFECSDGTSFSEEVEKTIKCGCVGCM
Download sequence
Identical sequences XP_019950691.1.63745

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