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Domain assignment for XP_020017699.1.5219 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020017699.1.5219
Domain Number 1 Region: 131-191
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 6.8e-25
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 2 Region: 358-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.77e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 818-874
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.61e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 414-470
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.18e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 5 Region: 762-818
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.91e-20
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 6 Region: 705-762
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.91e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 7 Region: 859-911
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.25e-19
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 8 Region: 322-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000108
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 9 Region: 668-719
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000233
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_020017699.1.5219
Sequence length 976
Comment LOW QUALITY PROTEIN: zinc finger protein 316 [Castor canadensis]; AA=GCF_001984765.1; RF=representative genome; TAX=51338; STAX=51338; NAME=Castor canadensis; AL=Scaffold; RT=Major
Sequence
MAALHMTPDSPVAQLERAEDGAECDPDQEEEEEKGKEGEEVEEEEEEIVVEEEEEEEEAV
VQEVAEVEVEANLEEEEEEDNDDVEEVLAEEQSPGLGTQEQALQASLVVTTAQAEDLEEE
DDEEEEDEEESQGLVTFEDVAVYFSMEEWERLDTDQRSLYKEVMQENYGILVSLGYPIPK
PDLIFRLEQGEEPWVPDSPHPEDGDIVTGVYTGAWYWTDDIEDHEEEDDEDFLAEMAEEE
NEPPGLWSAAYGVGDVPGTWGPDDSDSAQTAEEWGPEPGGLGVVADEAEAKPFLSGREPG
ANLLAPWAFPAVAAPIGRPETTCDVCGKVFPHRSRLAKHQRYHAAVKPFGCDECGKGFVY
RSHLAIHQRTHTGEKPFPCPDCGKRFVYKSHLVTHRRIHTGERPYRCAFCGAGFGRRSYL
VTHQRTHTGERPYPCPHCGRSFSQSSALARHQAVHTADRPHCCPDCGQAFRLRADFQRHR
RGGCCTEPGGDDPRREPXEVAAAAGPEETEEPEAGEADGVREAEAREETAEGKAEAPAAE
SKKDDPEPDRRVLEMGNGLGEGEGEGPSSHPLGLHFPVHPKSWLRPDGFPILGLPEFGER
LPADGRPVPGPLGGPLSLVEGAGLACDPFGGGGPGGGGGGSGLRAFGPSVGGLLAEPAPA
ALAEEESPWICSDCGKTFGARAALAKHQRYHAGERPHRCADCGKSFVYGSHLARHRRTHT
GERPXPCPECGARFARGSHLAAHVRGHTGEKPFVCGVCGAGFSRRAHLTAHGRAHTGERP
YACGECGRRFGQSAALTRHQWAHAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGEKPFRCA
DCGRGFAQRSNLAKHRRGHTGERPFPCPXCGKRFSQRSVLVTHQRTHTGERPYACANCGR
RFSQSSHLLTHMKTHRGAAARPARRPPPPAPKAEAPAKGQPSTGAGTLLEFAGGTSFSSE
STAFAGPSSAFEESIM
Download sequence
Identical sequences XP_020017699.1.5219

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