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Domain assignment for XP_020142487.1.48125 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020142487.1.48125
Domain Number 1 Region: 302-495
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.15e-38
Family SPRY domain 0.00029
Further Details:      
 
Domain Number 2 Region: 161-230
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000000984
Family RING finger domain, C3HC4 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020142487.1.48125
Sequence length 500
Comment RING finger protein 39 isoform X2 [Microcebus murinus]; AA=GCF_000165445.2; RF=representative genome; TAX=30608; STAX=30608; NAME=Microcebus murinus; AL=Chromosome; RT=Major
Sequence
MEGREARGNDSHTPTLEACQSRTNQARPVLPARPSDVGAPATWSDSRPSDAGTHAKSEPG
HSARLHTTGRAEGASALPIKPAVPGRFAHWPRLWLKTGRPRRGRKAAKLNAGDAERGTDS
ASSRTRPPSARSEAVAEVAEGAACRPRAPMDAPELGPGLVERLEQLATCPLCGGPFEDPV
LLACEHSFCRACLAGCWGAPPAAGTEAPPTACPCCGLPCPRRCLRSNVRLAVEVRISRGL
REKLAEPAARAGRRRGGRIPTMGCLDPRAEDIRKTWRRFDVPTPKSSNSEDDLPEDYPVV
KNMLHRLTADLTLDPGTAHRHLLISADRRSVQVAPPGTPAPPDGPTRFDQLPAVLGAQGF
GAGRHCWEVETAGAASCTDSSGDEDDGERRYAVGAAGESVQRKGRVRLCPAGAVWAVEGR
GGRLWALTAPEPTLLGGAGPPPRRIRVDLDWERGRVAFYDGHSLDLLFAFQAPGPLGERV
FPLFCTRDPRAPLRIVSAEG
Download sequence
Identical sequences XP_012591758.1.48125 XP_020142480.1.48125 XP_020142481.1.48125 XP_020142482.1.48125 XP_020142483.1.48125 XP_020142484.1.48125 XP_020142485.1.48125 XP_020142486.1.48125 XP_020142487.1.48125

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