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Domain assignment for XP_020334532.1.87700 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020334532.1.87700
Domain Number 1 Region: 4-142
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 2.35e-34
Family Rap30/74 interaction domains 0.00000311
Further Details:      
 
Domain Number 2 Region: 199-266
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 6.26e-25
Family DNA-binding domain from rap30 0.0000458
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020334532.1.87700
Sequence length 278
Comment general transcription factor IIF subunit 2-like [Oncorhynchus kisutch]; AA=GCF_002021735.1; RF=representative genome; TAX=8019; STAX=8019; NAME=Oncorhynchus kisutch; AL=Chromosome; RT=Major
Sequence
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIGKNQGKAEVEFTLNE
DLTMIDSLGDKPSGVQAPRDHPFTMQTVGGQTLAVFTETQSESSKGQSEERSDGSTSVSG
AGSGPERISLEGLVVQRAECRPAVSENYMKLKRLQIEELSKPVRLSQQLEKAVTTNYKPV
ANHSYNLEYDRKKKEEGKRARVDKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVSYLKEI
LRDIGIYNVKGTHKNTWELKPEYRHYQGGEEEEKETDD
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Identical sequences XP_020334532.1.87700 XP_020334533.1.87700 XP_021450226.1.32639

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