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Domain assignment for XP_020439041.1.2935 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020439041.1.2935
Domain Number 1 Region: 344-479
Classification Level Classification E-value
Superfamily C-type lectin-like 7.09e-43
Family C-type lectin domain 0.0001
Further Details:      
 
Domain Number 2 Region: 206-338
Classification Level Classification E-value
Superfamily C-type lectin-like 3.81e-36
Family C-type lectin domain 0.00039
Further Details:      
 
Domain Number 3 Region: 797-929
Classification Level Classification E-value
Superfamily C-type lectin-like 3.54e-34
Family C-type lectin domain 0.00035
Further Details:      
 
Domain Number 4 Region: 935-1083
Classification Level Classification E-value
Superfamily C-type lectin-like 1.65e-33
Family C-type lectin domain 0.00043
Further Details:      
 
Domain Number 5 Region: 489-623
Classification Level Classification E-value
Superfamily C-type lectin-like 9.78e-31
Family C-type lectin domain 0.0014
Further Details:      
 
Domain Number 6 Region: 1092-1219
Classification Level Classification E-value
Superfamily C-type lectin-like 1.25e-29
Family C-type lectin domain 0.0012
Further Details:      
 
Domain Number 7 Region: 631-781
Classification Level Classification E-value
Superfamily C-type lectin-like 1.99e-28
Family C-type lectin domain 0.00062
Further Details:      
 
Domain Number 8 Region: 1237-1369
Classification Level Classification E-value
Superfamily C-type lectin-like 1.24e-26
Family C-type lectin domain 0.0078
Further Details:      
 
Domain Number 9 Region: 143-201
Classification Level Classification E-value
Superfamily Kringle-like 9.71e-21
Family Fibronectin type II module 0.00087
Further Details:      
 
Domain Number 10 Region: 12-143
Classification Level Classification E-value
Superfamily Ricin B-like lectins 7.95e-17
Family Cysteine rich domain 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020439041.1.2935
Sequence length 1451
Comment C-type mannose receptor 2 isoform X2 [Corvus cornix cornix]; AA=GCF_000738735.2; RF=representative genome; TAX=932674; STAX=181096; NAME=Corvus cornix cornix; AL=Scaffold; RT=Major
Sequence
MLSPFPFFLSPDSKVFLIYNTGAQGCLETKDSLVRLAKGCNASAPAQQWKWVSRNRLFNV
GAMQCLGVSWHGANATAGLHLLATYXXXXXXVNMRWSCRGLGEQLSQHLGARLGNSSLDR
GDQAHGSQWRTYGTEEDLCSMPYSEIYTIQGNSHGKPCTIPFKYDNQWFHECTSTGREDG
HLWCATTQDYGKDERWGFCPIKSNDCETFWDKDHLTNSCYQFNFQSTLSWREAWNSCEQQ
GANLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDINGGWQWSDNSPLKYLNWESDQPDN
PSEENCGVIRTESSGGWQNRDCGIALPYVCKKKPNATADPFLTDSWSEVKVDCEPSWQPF
QSNCYRLVGEKKSWQEAKKTCLRSGGDLVSIHTLSELEFVTKEIKQDVEELWIGLNDLKL
QMNFEWSDGTPVRFTYWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQTLPSICKKPGP
VSQEKEEDDHGCRKGWKWHSPSCFWLGEDRVPYSDARKTCSDYSSTLVTITNRFEQAYVS
SLIYGWDGEYFWTALQDINETGAFRWLSGDEVMYTHWNRNQPGYNKGGCVALATGSSMGL
WEVKNCSTFKAKYICRQNLGTPVNPELPGPFPTPSLTATCPPGWSSDPKLRHCYKVFSFE
KLQEKKMWIAAQEFCRELGAQLLSLGSYEEEHFVANTLNKIFGESEPELHEQHWFWIGLN
RRDPAGDRSWRWSDGLGFFYHNFDRSNYDDDDIRSCAVLDLASLQWMPMQCEAQLDWICK
LPKGADVKEPEIATQGSKEWVKYQEAEYKFFEHHSTWLQAQRICSWFQAELTSVHSEAEL
RFLGQNLKKFSRGQEQHWWIGLHTYENDGRFKWSDGSLLNFVFWAPGKPRPISKDRKCVY
MTASREDWGDQKCMTALPYICKRSNGTAVKPSLPPVPAATSGGCPQGWLPFLSKCFSFNG
HNKGEIVKWPEAKQVCESQGAVLATIASPLEQAFITSMLPNISFDLWIGLHDAQREFQWV
EGEPLRHVSWAPGEPSGCSSSSPRDKPTNCVVVWHGSPPVFTGRWDDRSCLEEKHGYVCQ
RSIDPSLSPAQTPFPPSPTGTLFYHNSTYRILQKPLRWHEALLLCETLNATLATIPNPYS
QAFLTQAISSLRAPLWIGLANDEGGRSYSWLTEESLIYTNWQDGEPQQTTGCSYMDTDGS
WRTAGCDTKLQGGICQLQTGHLRMHKWSYSGSCPKSLEDSSWIPFRDHCYTFHMEITLRQ
KDAMRRCQKVGGTVLSIQDEMENVFVWEHLQAYEGLSKGAWLGMTFNPKGGTLVWHDNTA
VNYSNWGQHDTGPSMLSQNSCYWIQSSNGVWRLGSCTNVTMGVICKIPRVEESSFSRAAL
PENTTAIAVVVLSTLALCAVLGVVIFLYKRRQSAERGAFESARYSRTTANPSESAEKNIL
VSDMEMNEQQD
Download sequence
Identical sequences XP_020439041.1.2935

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