SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_020492208.1.8198 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_020492208.1.8198
Domain Number 1 Region: 48-164
Classification Level Classification E-value
Superfamily Hormone receptor domain 1.24e-28
Family Hormone receptor domain 0.0021
Further Details:      
 
Domain Number 2 Region: 123-420
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.0000174
Family Rhodopsin-like 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020492208.1.8198
Sequence length 478
Comment calcitonin gene-related peptide type 1 receptor [Labrus bergylta]; AA=GCF_900080235.1; RF=representative genome; TAX=56723; STAX=56723; NAME=Labrus bergylta; AL=Scaffold; RT=Major
Sequence
MAKRKMESIGRSWMVVLVLLCNLTKIFVKASMDANETQQQHPTNVYHDMGLTRNRIVTAQ
FECYQKIMKDNTNSREEAMCNRTWDGWLCWDDTRSGFTSEQHCPDYFQDFDPSEMVTKIC
SDNGHWFLHPESNRTWTNYTRCNEHTNEGRVTAMNLFYLALIGHGLSLTSLLVSLGIFFH
FKSLSCQRITLHKNLFFSFVLNSVITIIWLTAVANNTELVQRNPTSCKVSQFIHLYLFGC
NYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYLLGWGFPLIPASIHAIARSYYYNDNCWIS
AKTSLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESSLYMKAVRATLILVPLL
GIQYVLLPYKPEGRVSSEIYDYIMHILMHYQGLLVATIFCFFNGEVQAVLRRHWNQYNIQ
FGSSIGNHSDAMRSASYTASSITEVQGCYSIDGHSEHMNGKGCFDTDTPMLKSDSPFA
Download sequence
Identical sequences XP_020492208.1.8198

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]