SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_020570174.1.28442 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_020570174.1.28442
Domain Number 1 Region: 858-1039
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.26e-36
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 2 Region: 202-424
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.12e-35
Family Laminin G-like module 0.0028
Further Details:      
 
Domain Number 3 Region: 454-653
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.61e-35
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 4 Region: 665-855
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.74e-32
Family Laminin G-like module 0.0058
Further Details:      
 
Domain Number 5 Region: 21-177
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.27e-31
Family Laminin G-like module 0.007
Further Details:      
 
Domain Number 6 Region: 1081-1221,1250-1292
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.11e-30
Family Laminin G-like module 0.00000201
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020570174.1.28442
Sequence length 1424
Comment neurexin-3b-like isoform X13 [Oryzias latipes]; AA=GCF_000313675.1; RF=representative genome; TAX=8090; STAX=8090; NAME=Oryzias latipes; strain=Hd-rR; AL=Chromosome; RT=Major
Sequence
MNPNSLLRHVVMLLSTVLGFCGSLEFSGSKGQWARYQRWDASSTSDLTFQFKTSASEGLL
LYFDDGGYCDFLLLTLSEGKLQLRVSIDCAETTITSAKMVNDSRWHFAAINRENLRTGLA
VDGQTRTGEVRPQRHFMKIVSDLFLGGLPEDIRMSAITLPSVCELPAFRGVISDLSYGSK
LPTLINSQKVRLEMIGLCTENPCENGGICSLADGETYCDCSRTGYVGRYCTEAVPRKPGL
AHLKAEQGRNKVREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNRKFNDNSWHNIKVTRNLRQQSGIGHAM
VNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLQ
EVVYKNNDIRLELSRLARIDDPKMKLQGDIVFECENVPTLDPINFETPDSFLALPKWNTK
RVGSISFDFRTTEPNGLILFTQGRPQDRRDAKGQKNNKVDFFAVELLDGALFLLLDMGSG
TIKVKATQAKVNDDAWYHVDIQRDGRSGIISVNSHRTPFTASGENEILDLEGDLYLGGLP
YNRAGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQIAQMQNITDIKFSCSKITGKH
CDSSPCKNNGACREGWNRFVCDCTGTGFWDSTCEREASILSFDGTMYMKVVMPNVMHTEA
EDVSLRFMSQRAFGLLMAASSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLY
AGEKLNDNEWHSVRVVRRGKNFKLIVDEDMAEGQMAGDHTRLEFNNVETGILTEKRFVSS
APSPFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKASYLGLAT
LQAYTTMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSD
SPLNDNQWHNVVITRDASNTHTLKVDSKSVNQNVNGAKNLDLKGDLFIGGLGPNMYQNLP
KLVVSREGFQGCLATVDLNGRLPDLISDALFRSGQIERGCEVAFTKADLQGPSTTCQEDS
CANMGVCIQQWENFTCDCSMTSYTGTYCNDPGTTYIFGKGGGLITYTWPNNERPSTRADR
LAVGFSTTINDGILVRIDSASGLADFIMLHIEQGKVGVTFNIGTVDISVKETSTVVNDGK
YHLVRFTRNGGNATLQVDNWPINEHFPSGNSDFERFHMANKKIPFKYTRPVEEWLQEKGR
QLTIFNTQASISIGGNDRLRPYQGQLSGLYYNGLKVLNMAAEGHPNIKVTGSVRLVGDVP
PSRGATRTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDL
EECDSGHAAKSSNAARPLRAAFTWTWQLMYTFTPIYVISFLVCS
Download sequence
Identical sequences XP_020570174.1.28442

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]