SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_020862026.1.61212 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_020862026.1.61212
Domain Number 1 Region: 296-357
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 9.02e-25
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 
Domain Number 2 Region: 523-579
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.88e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 579-635
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.64e-22
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 4 Region: 941-997
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.44e-21
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 5 Region: 828-885
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.53e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 6 Region: 982-1034
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.17e-20
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 7 Region: 885-941
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.95e-20
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 8 Region: 487-536
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000373
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 9 Region: 791-842
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000403
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020862026.1.61212
Sequence length 1101
Comment zinc finger protein 316 [Phascolarctos cinereus]; AA=GCF_002099425.1; RF=representative genome; TAX=38626; STAX=38626; NAME=Phascolarctos cinereus; AL=Contig; RT=Major
Sequence
MAALHTSPDSPTSQLERMEVRPECEVDHEEREGSPDLVEDSPEEIEGSPEPMEESPDEGE
GSPEPIEGSPEEDEGSPEEDEGSPEEDEGSPEEDEGSPEEDERNSELIDGSPEAIDDLPE
PIDGISEPILGSPEPMMGSPGPIDDIPEPIDGISEPIMGSPEPIDSIPEPIMGSPEVIEG
SPEPIMGSPEVIEGSPEPIMGSPEVIEGSPESIEGSPEPIMGSPEVIEGSPEPIEGSPDV
IEGSPEPEPQEPLNRDSKMESPVLQEKAVSVSWVPAIFKKEILDDDETSTDFLTTESQGL
VTFEDVAVYFSLEEWGRLNEAQKDLYKEVMQENYGILVSLGYPIPKPDVISRMERGEELW
VPDSPVPEEGDIVTGVYTGGWFWNEDEEDEDEDEEEGPLETPEESEPPGVWSAAYGVGDV
PGTWGPDDSIQVQPTDLWGGDPSNMGMITEGQEIKPILHSGEAGAPLLPPWAFSAVVEAA
GGRPETTCDVCGKVFPHRSGLAKHRRYHAAVKPFGCEECGKGFVYRSHLAIHQRTHTGEK
PFPCPDCGKRFVYKSHLVTHRRIHTGERPYRCSFCGAGFGRRSYLVTHQRTHTGERPYPC
PQCGRSFSQSSALARHQAVHTAEKPHCCSDCGRAFRLRADFQRHRRGGKCSDLREEARRE
ESEGPELGGESLDPVNEGSVIDRNYPELGNGFGEGEGPSHPLDFHFPLPPKSWLHGENLP
MLALQDFGERVAHELVDAPPIPGHLGSQISLIDGTAMPCDPCASGLLSFGPSVGSLLSDP
QPSSMLEEETPWICSDCGKTFGRRAALAKHQRYHAGDRPHRCADCGKSFVYGSHLARHRR
THTGERPFPCPECGARFARGSHLAAHVRGHTGEKPFVCGVCGAGFSRRAHLTAHGRAHTG
ERPYACGECGRRFGQSAALTRHQWAHAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGEKPF
RCADCGRGFAQRSNLAKHRRGHTGERPFPCPECGKRFSQRSVLVTHQRTHTGERPYACAA
CGRRFSQSSHLLTHMKTHRGTTTTGPAAKVEGPGQNQASRPSGEKEDSSNTVVEFGGNSS
FASEEPTMFPVPSCSYEETLM
Download sequence
Identical sequences XP_020862026.1.61212 XP_020862027.1.61212 XP_020862028.1.61212 XP_020862029.1.61212

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]