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Domain assignment for XP_020925306.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  XP_020925306.1.46622
Domain Number - Region: 180-204
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00262
Family CCCH zinc finger 0.0036
Further Details:      
 
Domain Number - Region: 13-42
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0196
Family CCCH zinc finger 0.004
Further Details:      
 
Domain Number - Region: 214-238
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0563
Family CCCH zinc finger 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020925306.1.46622
Sequence length 387
Comment muscleblind-like protein 1 isoform X7 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
APSLATNASAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDR
LEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPA
HLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRP
ALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVP
FAATATANQIPIISAEHLTSHKYVTQM
Download sequence
Identical sequences A0A2I3FUN3 A0A2J8WT51 A0A2K5DIE8 A0A2K5JMA5 A0A2K5NSL4 A0A2K5SBP2 A0A2K6A3W3 A0A2K6BT06 A0A2K6KR35 A0A2K6N7Z4 A0A2K6SLW9 F1M9N4 F6UUJ0 F7DHI7 G1LQN0 G7MJH2 G7NZL5
ENSTSYP00000009625 ENSAMEP00000009363 ENSTSYP00000009625 NP_001178495.1.100692 NP_001178495.1.4139 XP_001106579.2.72884 XP_001488787.1.31192 XP_002716341.1.1745 XP_002759528.1.60252 XP_002814240.1.23681 XP_003132542.1.46622 XP_003925070.1.74449 XP_004003289.1.66739 XP_004314972.1.83887 XP_004478872.1.11602 XP_004709085.1.18182 XP_004755631.1.14098 XP_005546193.1.63531 XP_005634636.1.84170 XP_005675483.1.57651 XP_006075692.1.26621 XP_006149809.1.99106 XP_006178062.1.101512 XP_006202878.1.17985 XP_006868030.1.41390 XP_006908282.1.64745 XP_006997892.1.50099 XP_007086351.1.5354 XP_007188212.1.59432 XP_007471994.1.90284 XP_007938342.1.48129 XP_008006865.1.81039 XP_008519476.1.77740 XP_008842930.1.79516 XP_010370390.1.97406 XP_010833701.1.44457 XP_010950305.1.22495 XP_010950306.1.22495 XP_010984933.1.51371 XP_011379144.1.92234 XP_011769710.1.29376 XP_011941473.1.92194 XP_012002573.1.54773 XP_012292437.1.9421 XP_012580319.1.23501 XP_012580320.1.23501 XP_012629846.1.48125 XP_012663282.1.62490 XP_013203999.1.66349 XP_014334489.1.15283 XP_014409058.1.101512 XP_014652083.1.5094 XP_014705054.1.49734 XP_014705055.1.49734 XP_014927977.1.86478 XP_015093473.1.17985 XP_017378365.1.71028 XP_017446156.1.100692 XP_017532703.1.32401 XP_017704316.1.44346 XP_019295452.1.44245 XP_019483027.1.44202 XP_019587565.1.88060 XP_019652080.1.58354 XP_019666107.1.62641 XP_020737745.1.74333 XP_020925306.1.46622 XP_021541608.1.83697 ENSNLEP00000004323 ENSNLEP00000004323 ENSTTRP00000009475 ENSAMEP00000009363 ENSRNOP00000033304 ENSTTRP00000009475 ENSMMUP00000020922 ENSMMUP00000020925 ENSCJAP00000001838 ENSCAFP00000012631 ENSOCUP00000006572 ENSDNOP00000020424 9544.ENSMMUP00000020922 9986.ENSOCUP00000006572 ENSCJAP00000044837

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