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Domain assignment for XP_020928762.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020928762.1.46622
Domain Number 1 Region: 740-870
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 3.42e-31
Family Synaptotagmin-like (S variant) 0.00000216
Further Details:      
 
Domain Number 2 Region: 26-68,109-189
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 3.45e-24
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0073
Further Details:      
 
Domain Number 3 Region: 1218-1337
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 1.24e-23
Family Synaptotagmin-like (S variant) 0.0088
Further Details:      
 
Domain Number 4 Region: 575-702
Classification Level Classification E-value
Superfamily PDZ domain-like 1.28e-19
Family PDZ domain 0.0000175
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020928762.1.46622
Sequence length 1366
Comment regulating synaptic membrane exocytosis protein 1 isoform X45 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MSSAVGPRGPRPPTVPPPMPELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MVKPAACKTPRNAEHQPHQPPPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICR
KTKFADGCGHLCSYCRTRFCARCGGRVSLRSNSEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEAPREKKARLQERSRSQTPLSTAAASSQDQAPSSAQPD
RSKGAELSQPAGGPEQKQASSRSRSEPPRDRKKTPGLSEQNGKGAPKGERKRVPRSSVQP
GEGPAEERERKERRESRRLEKGRSQDYPDVPEKREDGPAVEDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAAAGPEGRAGPRAPAAARGSP
PASPRAYSAERTADARAPSAQQLANRSPPAPRPGPGPADVPESRAPEPLRKQSRLDPGSA
VLVRKAKREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTP
EYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVI
LNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNG
KPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMER
PSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPY
VKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEE
ESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGETSSKKLQRS
QRISDSDISDYEVDDGIGVVPPVGYRSSAREGKPTTLTVPEQQRTTHHRSRSVSPHRGDD
QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSELL
MLPRAKRGRSAECLHTTSDLQPSLDRARSASTNCLRPDASLHSPERERHSRKSERSSIQK
QTRKGTAADAERMHRQGSPTQSPPADSAFSSRRGRQLPQVPVRSSSIEQESGHKKLKSTI
QRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPA
QLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGA
CIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEEL
DLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
Download sequence
Identical sequences XP_020928762.1.46622

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