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Domain assignment for XP_020945555.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020945555.1.46622
Domain Number 1 Region: 44-78
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000235
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 
Domain Number 2 Region: 772-830
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000405
Family TSP-1 type 1 repeat 0.0044
Further Details:      
 
Domain Number 3 Region: 961-1015
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000484
Family TSP-1 type 1 repeat 0.0035
Further Details:      
 
Domain Number 4 Region: 714-772
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000942
Family TSP-1 type 1 repeat 0.007
Further Details:      
 
Domain Number 5 Region: 902-960
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000432
Family TSP-1 type 1 repeat 0.0039
Further Details:      
 
Domain Number 6 Region: 834-898
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000157
Family TSP-1 type 1 repeat 0.0046
Further Details:      
 
Weak hits

Sequence:  XP_020945555.1.46622
Domain Number - Region: 657-712
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000103
Family TSP-1 type 1 repeat 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020945555.1.46622
Sequence length 1064
Comment ADAMTS-like protein 4 isoform X2 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MEKQAIRPGLCLMLLLSLPQLCLDQEVLSGHSLQTPPEESQGPEGVWGPWDQWASCSQPC
GVGVQRRSRKCQLPAAHLHQGRPPRHPEGLLPRGQGPRPQTSRETLPLYRPPPRGRGGPF
RGPASQLGREEARETQGARRSRVRDPIKPGMFGYGRVPFALPLHRNRRHPRRPLRSELSQ
TSDLPSLMPRAVPSSANHTPQTELPPTAPSAPARSPPADSPSPEAAQTEVPSRTEPAPTG
PHPSTRASVTGPSSPPPPGEGRSFHASPQPRRPGSQGGASPQLAERHPHPFLSVPPGRGQ
QSPERWRPGGDRLRSLTESAPHHPHGWLPLLSTGPHSSSLWSLFAPSSPVPRCSGESEQL
RACSQAPCPPEQPDPRALQCAAFDSQEFMGQLYQWEPFTEVQGSQRCELNCRPRGFRFYV
RHTEKVQDGTLCQPGALDICVAGRCLSPGCDGILGSGRRPDGCGVCGGDDSTCRLVSGNL
TDPGGSLGYQKILVIPAGASRLHIAQLRPSSNYIALRGPGGQSIINGNWAVDPPGSYTAG
GTVFRYNRPPREEGAGESLSAEGPTTQPVDVYMIFQEESPGVFYQYVISSPPPDLENPTP
EPHLPQLQPEIFRVEPPPASASRPARTPGTLQRQVRIPQMPAPSHPRTHLGSPTGYWKRV
GHSECSASCGKGVWRPIFLCVSRESGEELDERSCAMGARPPASQEPCHGPPCPPYWETGE
WTSCSRSCGPGTQHRQLRCRQEFGGGGSSVPPERCGHLPRPNITQPCQLRLCGHWEVRSP
WSQCSVRCGRGQRSRQVRCVGNNGDEVSEQECASGPPRPPSREACDMGPCTTAWFHSDWS
SKCSAECGTGIQRRSVVCLGSGEAHGVGQEEAGAGASEQTCAPGSRPPDMRACSLGPCEV
TWCWYTGPWAECSSECGSGTQRRDIICVSKLGTEFNVTSPSNCSHLPRPPALQPCQGQNC
QDRWFSTPWSPCSRSCQGGVQTREVQCLTANQTLSTRCPPHLRPSRKRSCNSQPCSQRPD
DQCKDSSPHCPLVVQARLCVYPYYTSTCCRSCAHVLERSPPEPA
Download sequence
Identical sequences F1SS80
XP_005663557.1.46622 XP_020945555.1.46622 ENSSSCP00000007092 ENSSSCP00000007092

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