SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_020951101.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_020951101.1.46622
Domain Number 1 Region: 302-517
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 3.01e-51
Family DBL homology domain (DH-domain) 0.00014
Further Details:      
 
Domain Number 2 Region: 819-1119
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000000000427
Family WD40-repeat 0.021
Further Details:      
 
Domain Number 3 Region: 530-613,707-765
Classification Level Classification E-value
Superfamily PH domain-like 0.0000000724
Family Pleckstrin-homology domain (PH domain) 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020951101.1.46622
Sequence length 1279
Comment rho guanine nucleotide exchange factor 10-like protein isoform X5 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MASSHPPQAAVGDRLLPGGPGPSPQAEDDPGEAFEFDDSDDDEDTSAGLGVPGAAPEKEA
DAPLIHLDSAPTTDPDPAAAPPQTQAPVVLSNGEAVDAAFSGVHRSSWRRKSSRRIERFT
FPALEEDVIYDDVPCENLDAHQSGAERNLLYEDVHRDGAPREAEDLGWSSSEFESYSEDS
AEEAKPEVEPTKHRVSFQPKLSPDLTRLKERYARTKRDILALRVGGRDMQELKHKYDCKM
TQLMKAAKSGTKDGLEKTRIAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVTDIKPPAPEL
GPMPDGLSPQQVVRRHILGSIVQSEGSYVESLKRVLQDYRNPLMEMEPKALSVRKCQVVF
FRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMSI
IKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDR
LSLQLALTELETLAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETL
TETVYGDRGQLIKSKERRVFLLNDMLVCANINYKPANPRGQLEISSLVPLGPKYVVKWNT
ALPQVQVVEVGQEGGSYDKDNVLIQHAGAKKASASGQAQNKVYLGPPRLFQELQDLQKDL
AVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPD
KSGRPISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPIL
ACCIPAFSSRGLSLQLGALVHSPVSCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFS
LNRPSPRTVKSFPLAAPVLCMEYIPEPEEGESRDGEESRRAADASAGVHPTICLGLQDGS
ILVYSSVDTGTQCLATCRSPGLQPVLCLRHSPFHLFAGLQDGTLAAYPRSSGGIPWDLES
PPVCLTVGPGPVRTLLSLEDAVWASCGSRVTVLDATSLQTQQSFEAHQDEAVSVTHMVKA
GSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCITSLLICQGLLWVGT
DQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPQ
AEEDKLDGQAHEPAPIPASHVGRELTRKKGILLQYRLRSTAHLPGPLLSVREPEPMDGSA
LEHSEEDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSAPGGSGKP
APCGETDSALLIWQVPLML
Download sequence
Identical sequences A0A287AJM5
XP_020951101.1.46622

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]