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Domain assignment for XP_020955628.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020955628.1.46622
Domain Number 1 Region: 206-418
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.26e-37
Family Laminin G-like module 0.0024
Further Details:      
 
Domain Number 2 Region: 855-1033
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.42e-35
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 3 Region: 453-650
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.75e-35
Family Laminin G-like module 0.0012
Further Details:      
 
Domain Number 4 Region: 659-849
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.59e-35
Family Laminin G-like module 0.0085
Further Details:      
 
Domain Number 5 Region: 25-180
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.13e-31
Family Laminin G-like module 0.0046
Further Details:      
 
Domain Number 6 Region: 1066-1206,1235-1277
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.31e-30
Family Laminin G-like module 0.00000225
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_020955628.1.46622
Sequence length 1680
Comment neurexin 3 isoform X9 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MSFTTHSVFFTLKVSVLLGSLLGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVS
TGLLLYLDDGGVCDFLCLSLVDGRVRLRFSMDCAETEVLSHKQVNDSSWHFLMVSRDRLR
TVLVLDGEGQSGELQPQRPYMDVVSDLFLGGVPADIRPSALTLDGVQAMPGFKGLILDLK
YGNSEPRLLGSQGVQLDAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGKLCSEDVSQ
GPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHA
MVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDIRLELSRLARIGDTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSIS
FDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKA
TQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGL
ILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPC
KNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAEDVSFR
FMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLN
DNEWHTVRVVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRYISVVPSSFI
GHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLSLATLQAYTS
MHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDN
QWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR
DGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTCQEDSCANQGVCMQQWEGFT
CDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTVKDGILV
RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNATL
QVDNWPVNEHYPTGNTDNERFQMVKQKIPFKYNRPVEEWLQEKGRQLTIFNTQAQIAIGG
KDKGRLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSILGTTQTTSMPPEM
STTVMETTTTMATTTTRKNRSTASIQPTSDDLVSSAECSSDDEDFVECEPSTGGELVIPL
LVEDPLATPPIATRAPSITLPPTFRPLLTIIETTKDSLSMTSEAGLPCLSDQGSDGCDDD
GLVISGYGSGETFDSNLPPTDDEDFYTTFSLVTDKSLSTSIFEGGYKAHAPKWESKDFRP
NKVSETSRTTTTSLSPELIRFTASSSSGMVPKLPAGKMNNRDLKPQPDIVLLPLPTAYEL
DSTKLKSPLITSPMFRNVPTANPTEPGVRRVPGASEVIRESSSTTGMVVGIVAAAALCIL
ILLYAMYKYRNRDEGSYQVDETRNYISNSAQSNGTLIKEKQQSSKSGHKKQKNKDKEYYV
Download sequence
Identical sequences XP_020955628.1.46622

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