SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_021042649.1.100879 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_021042649.1.100879
Domain Number 1 Region: 145-206
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.7e-24
Family KRAB domain (Kruppel-associated box) 0.0018
Further Details:      
 
Domain Number 2 Region: 373-429
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.66e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 852-908
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.95e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 739-796
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.26e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 5 Region: 893-945
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.78e-20
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 6 Region: 429-485
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.97e-20
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 7 Region: 796-852
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.23e-19
Family Classic zinc finger, C2H2 0.0084
Further Details:      
 
Domain Number 8 Region: 702-753
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000121
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 9 Region: 337-386
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000019
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_021042649.1.100879
Sequence length 1014
Comment zinc finger protein 316 [Mus pahari]; AA=GCF_900095145.1; RF=representative genome; TAX=10093; STAX=10093; NAME=Mus pahari; AL=Chromosome; RT=Major
Sequence
MAALHTAPDSPATQLEPADDGSGCDADPEEEEEEEQQQQEEEEEEEEEVVVEVATPVQEV
AEVEVEANSADNGGGDDDGDDGDVEEVLAEEQTLSLGTQERHSDGGDAKAPVLQGKALQT
SRVSPTTQDEDAEEEEEEEDEEHFLTHGLVTFEDVAVYFSLEEWERLGVDQRDLYREVMQ
ENYGILVSLGYPIPKPDLIFHLEQGEEPWVEDGPHPEEGDVVTGVYTGAWFWNDDIEDHE
EEDDEDFLAEMAEEENEPPGLWSAAYGVGDVPGTWGPDDSDSVQTPEGWGPNPGSLGILV
EEVEAKHFLSGREPGENFLVPWAFPAVAVPIGCPETTCDVCGKVFPHRSRLAKHQRYHAA
VKPFGCEECGKGFVYRSHLAIHQRTHTGEKPFPCPDCGKRFVYKSHLVTHRRIHTGERPY
RCVFCGAGFGRRSYLVTHQRTHTGERPYPCLHCGRSFSQSSALARHQAVHTADRPHCCPD
CGQAFRLRADFQRHRRGGGCTEPSSGDGARMAPHDVGMAPNEVEMAVAAVATAEPEELEA
APAETEEPVAGVADGDTEAEVRQDEQVVVAPAAEATVPDSKKDPEPDRRFRGMGNGLAER
EGPSSHPFGFHFPMHPKSWLHPDGFPMLGFPEFSERLQADGRHLPGPLGSPLSLQGMGLA
CDPFRSAGPGAGADGGLRAFAPAVGSLLSEPAPAALAEEESPWICSDCGKTFGRRAALAK
HQRYHAGERPHRCADCGKSFVYGSHLARHRRTHTGERPFPCPECGARFARGSHLAAHVRG
HTGEKPFVCGVCGAGFSRRAHLTAHGRAHTGERPYACAECGRRFGQSAALTRHQWAHAEE
KPHRCPDCGKGFGHSSDFKRHRRTHTGEKPFRCADCGRGFAQRSNLAKHRRGHTGERPFP
CPECGKRFSQRSVLVTHQRTHTGERPYLCSHCGRRFSQSSHLLTHMKTHRGPGGAPAQHT
STKAQAPAKATSPRPPPGSGSGSGTLLEFAGGTSFGSDPAAFAAPSGSYEESIL
Download sequence
Identical sequences XP_021042649.1.100879

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]