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Domain assignment for XP_021060739.1.100879 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021060739.1.100879
Domain Number 1 Region: 128-205
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.8e-17
Family Eukaryotic type KH-domain (KH-domain type I) 0.0011
Further Details:      
 
Domain Number 2 Region: 878-939
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000000000085
Family SAM (sterile alpha motif) domain 0.01
Further Details:      
 
Domain Number 3 Region: 264-354
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.000000000000161
Family Eukaryotic type KH-domain (KH-domain type I) 0.003
Further Details:      
 
Domain Number 4 Region: 78-132
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000161
Family Eukaryotic type KH-domain (KH-domain type I) 0.0074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_021060739.1.100879
Sequence length 977
Comment protein bicaudal C homolog 1 isoform X1 [Mus pahari]; AA=GCF_900095145.1; RF=representative genome; TAX=10093; STAX=10093; NAME=Mus pahari; AL=Chromosome; RT=Major
Sequence
MASQGEPGYLAAAQSDPGSNSERSTDSPVAGSEDDLVAAAPLLHSPEWSEERFRVDRKKL
EAMLQAAAEGKGRSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKEDVKEA
KEMIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPAGVESARARIRELLPLVLMFELPIAGILQPVPDPNTPSIQHISQTYSVS
VSFKQRSRMYGATVIVRGSQNNTNAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLF
MMGRNGSNVKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVLMF
DMKEDIEVDPQVIAQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLE
SSGVSIATSLSPASCPAGLACPSLDILASAGLGLTGLGLLGPTALSLNTSATPNSLLNAL
NTSVSPLQSSSSGTPSPTLWAPPLANTASATGFSTIPHLMLPSTAQATLTNILLSGVPTY
GHTAPSPPPGLTPVDVHINSMQTEGKNISASINGHVQPPNMKYGPLSTSSLGEKVLSSNH
GDPSMQTAGPEQASSKSNSVEGCNDAFVEVGMPRSPSHSGNAGDLKQMLGSSKVSCAKRQ
TVELLQGTKNSHLHSTDRLLSDPELSATESPLADKKAPGSERAAERAAAAQQNSERARLA
SQPTYVHMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRA
NHVSYKPTMTTAYEGSSLSLSRSSSREHLASGSESDNWRDRNGIGPMGHGEFSAPIGSPK
RKQNKSREHYLSSSNYMDCISSLTGSNGCNLNSCFKGSDLPELFSKLGLGKYTDVFQQQE
IDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRKLFEPPTASCTSFLEGGASG
RLPRQYHSDIASVSGRW
Download sequence
Identical sequences XP_021060739.1.100879

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