SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_021247636.1.32913 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_021247636.1.32913
Domain Number 1 Region: 51-114,285-354,386-612
Classification Level Classification E-value
Superfamily L domain-like 7.65e-54
Family Leucine rich effector protein YopM 0.018
Further Details:      
 
Domain Number 2 Region: 702-849
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 6.8e-44
Family Toll/Interleukin receptor TIR domain 0.00000646
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_021247636.1.32913
Sequence length 868
Comment toll-like receptor 2 isoform X2 [Numida meleagris]; AA=GCF_002078875.1; RF=representative genome; TAX=8996; STAX=8996; NAME=Numida meleagris; breed=g44 Domestic line; AL=Chromosome; RT=Major
Sequence
MRILIGSLYFYFVSFLFSRVNGFLTQRTSPASSFLFYNYSYLNFSSVAEAQAPKTARVLN
FSHNAIEKITKRDFEGFDVLEVLDLSYNHIKDIEPGAFENLLSLVSVNLSFNDKNLLVPG
LAPHLKLMPTSGAPGPSQICMYFQKSAEAALKPPAPAELLPHLEDPSDLGSVKPSFRRRR
AEENTTSPPTATLRPDTCAAPINGLLDLSRSKLSDEELTAKLDPDLCQAQLGAVLEFNIS
HSELEMDLLSLFILFLPMEDIQSVDASYNKITINNIDVEAICHFPFSNFSFLNISNNPIN
SLETMCLPPTITVIDLSFTNISTIPANFAKKLSKLEHMYVQGNQLIYTVRPESLSATPKP
PPGTVHISAISFVRNQAGTPIESLPERVKHLKVSNCSIVELPEWFANRMQELLFLDLSSN
RISMLPDLPISLQHLDVSNSDIKTIPPSFKSLSNLTTFNIQNNKITDMHPEYFPSTLTKC
DISKNKLKVLSLSKALENLDSLNVSGNLLARLEPVSQLSALANLDSSHNLISELPDHFGQ
SLPMLKYFNLSGNKISFLQRGSLPASLEELDISDNAITTIVQDTFGQLTSLSVLTVQGKH
FFCNCDLYWFVNVYMRNPHLQINGKDDLRCSFPPDRRGLLVKSSNLTLLHCSLGIQMAIT
ACVAILVVLVLTGLCWRFDGLWYVRMGWYWCMAKRKQYKKRPENKPFDAFISYSEHDAEW
TKENLLKKLETDGFKICYHERDFKPGHPVLGNIFYCIENSHKVLFVLSPSFVNSCWCQYE
LYFAEHRVLDENQDSLIMIVLEDLPPNSVPQKFSKLRKLLKRKTYLKWSPEEHKQKIFWH
QLAAVLKTTNEPLVRAENGPNEDIIEME
Download sequence
Identical sequences XP_021247636.1.32913

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]