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Domain assignment for XP_021280952.1.83089 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021280952.1.83089
Domain Number 1 Region: 109-192
Classification Level Classification E-value
Superfamily BRCT domain 2.76e-20
Family DNA topoisomerase II binding protein 1, TopBP1 0.069
Further Details:      
 
Domain Number 2 Region: 914-999
Classification Level Classification E-value
Superfamily BRCT domain 7.41e-16
Family BRCT domain 0.053
Further Details:      
 
Domain Number 3 Region: 1152-1219
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000000664
Family PHD domain 0.0051
Further Details:      
 
Domain Number 4 Region: 7-92
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000174
Family DNA topoisomerase II binding protein 1, TopBP1 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_021280952.1.83089
Sequence length 1236
Comment BRCT domain-containing protein At4g02110 [Herrania umbratica]; AA=GCF_002168275.1; RF=representative genome; TAX=108875; STAX=108875; NAME=Herrania umbratica; cultivar=Fairchild; AL=Scaffold; RT=Major
Sequence
MLESDTPSKTFLGVRFCLFGFDPVNEHKIRVKLINGGGVGVGQYNQNCTHVIVDKIVYDD
PVCVAARNDGKIVVTGLWVDHSFDIGMPVDATSIMYKPLRDLNGIPGAKSLIICLTGYQR
QDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEKYELAKKIKKIKLINHRWLEDCL
REWKLLSEANYSKSGFDLEMIEAEAKDSEDEAEETVSKQSGQKSLNRSPNNLKAGMLSSN
ELPNSAVEVPTLAMPRHSPNTKEILLTPGKSHQGTGFNNINVPELHAFKDAVLGNASFIK
LAEPNNRSPNSTKVDNSLASTSKSPSLSDEKFTAISYTRKTPRKSPAKSNLPNLSGEILG
NSGVSTQGIKFKDASDNSSSKMQQPEERISSCFVESPRKRDLCHGEDSAGILPRKRELEL
STSSSNSQKMSHNAKAGIKGSAVGTEQQEPTSLVGDQLHIKDCSVEGTGYLNIVPNSCAS
NATAKSLTNDLSSFVTVTAEDRRNNTDETSPKISFRGYRESTMAGKQDMQNENADEKSPQ
MSFKGLGESTSASGPYIGDSGLGRCVQVVREPGEPPNKKQHVEIPSLDDRKLEMENSHSP
ATLDLLEGGSDKLETKPLNKKMLAKKTLGSRPKLSNIANRKGSIYSSKIASENDSTICLS
GANDKTIHNSASELEASPSTINMEAAKDVVKKVVTDVTGCKAQFVNDETEAPDEEDENDF
EKTHEKQKSELVESACKVDTIIEVEHVRQDSKVALHESLTILENGTNGTDPKRAVGSKNS
ELGESTLKCDGLKRKTSKRTKQLSGKAKMKTVTSESKNDLVGEDTSVGKNVEEKDDEKEN
FLPHPVGKINSSNESSKVNSLAADKCSPVDPKEIAGKSVEPNKKAVKTNDKFGKVDSNTQ
IVQKVFNRFETEPVWFILSGHRLQRKEFQQVIRRLKGKVCRDSHQWSYQATHFIAPDIRR
TEKLFAAAASGSWILKTDYLSACNQAGKFLAEEPYEWHRNGLSEDGAISLAAPRKWRHLR
ERTGHGAFYGMRIIVYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKSGVDFAVVSP
GMPRVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVLYNTQEWAEKSFTNLTNRAE
EIVEDLTTPQRPDDCGSNDVTCQVCDSPERGEVMLICGDESGSVGCGVGIHIDCCDPPLE
DVPDDAWFCPKCSRISRNRATPPRKRKKGTSQSKGK
Download sequence
Identical sequences XP_021280952.1.83089

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