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Domain assignment for XP_021322613.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021322613.1.45394
Domain Number 1 Region: 969-1239
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.58e-71
Family Tandem AAA-ATPase domain 0.0000178
Further Details:      
 
Domain Number 2 Region: 718-967
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 7.75e-55
Family Tandem AAA-ATPase domain 0.0000658
Further Details:      
 
Domain Number 3 Region: 472-519,546-592
Classification Level Classification E-value
Superfamily Chromo domain-like 4.67e-17
Family Chromo domain 0.02
Further Details:      
 
Domain Number 4 Region: 347-421
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 8.42e-17
Family PHD domain 0.0028
Further Details:      
 
Domain Number 5 Region: 612-685
Classification Level Classification E-value
Superfamily Chromo domain-like 0.00000000000000194
Family Chromo domain 0.0068
Further Details:      
 
Weak hits

Sequence:  XP_021322613.1.45394
Domain Number - Region: 168-206
Classification Level Classification E-value
Superfamily HMG-box 0.00223
Family HMG-box 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_021322613.1.45394
Sequence length 1953
Comment chromodomain-helicase-DNA-binding protein 4 isoform X1 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MSGSEDDRDRFEPMGDDIEEQISETDTPKSKKKKKAKKSRESRTSKRQKVIREEIAVSSP
EVMEAIRMAEGEEEEDRVMRSESEGSDYAPSKKKKKRSSSSKDRKKGSAGEKAGGSGGKS
KRKEPEPEEEDDDDDDDGQEPKSSSQLLADWGMKDIDYTFTQEDYNSLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPMRGSASANAALAAANVAAAVESMVTKVDAG
GGGGPALATAPPTTTAAPVAAPPPPQQPPAVPLRKAKTKEGKGPNARRKTKPTPKPQDKK
SKAKKVAPLKIKLGNFKRKRSSSGEEDDGESDFDSFSVSDGSNSRSSRSKNKKAKSSKKK
KKMDEDADGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCE
KEGIQWEAREESSEGEEENDDGRRDDGDVEEEDDHHMEFCRVCKDGGELLCCDTCPSSYH
LHCLNPPLPDIPNGEWICPRCLSPPLKGKVQKVLTWRWGEAPPPMPVPRPADLPAEAPDP
PPMIGRKEREFFVKWCNKSYWHCSWVQELQLELNCQVMFRNYQRKTDMEEPPNLEMGAEG
DEDKSCKRKNKDPFYARMEDKYGRFGVKIEWLFIHRILNHSVDKKNNVHYLIKWRDLPYD
QSTWESEDMDVPDFETYKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTI
KFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK
EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRG
GKKASKMKKEAAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLN
NYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDML
GPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLN
VVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLMLLFKMLKKLKEGGHRVL
IFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGG
LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKK
KMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKDELGEGDNKEEDSSVIHYDDKA
IDRLLDRNQDATEDTELQSMNEYLSSFKVAQYVVKDEDEEEEDVDREIIKQEESVDPDYW
EKLLRHHYEQQQEDLARHLGKGKRPRKPVNYNDCSQEDRGSRRDWQDDQSDNQSDYSVAS
EEGDEDFDERSEAANSRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAV
MRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLS
RQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMKELEESKRAAAIAAGEDPKTPSTGTPA
DTQPNTPAPEDLSKTEDIKELEEKTEGDGEKEVKGSRQEDEIIEIPDEGEKSPSSAKKEE
KTDKESEASSEKDGGSRENEKDGEKEKSAESKENMSSDVKADGSDATNSGDSTKTKEESS
EEKMDTSPASDEKKELKDEKDGVKPEDSAKLQNGENAKETSGGGDGVSEEKKKAVKQRFM
FNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIIFHGYARWQDVQNDPR
FAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTEDPSHPSMA
LNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIAR
IPPVAVRLQMSERSILSRLASRGPEVTQTQAQR
Download sequence
Identical sequences F1RBT2
ENSDARP00000087334 ENSDARP00000124629 XP_021322613.1.45394 ENSDARP00000087334

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