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Domain assignment for XP_021403106.1.53032 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021403106.1.53032
Domain Number 1 Region: 254-324
Classification Level Classification E-value
Superfamily Homeodomain-like 2.1e-20
Family Homeodomain 0.0022
Further Details:      
 
Domain Number 2 Region: 97-165
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000000618
Family LIM domain 0.014
Further Details:      
 
Domain Number 3 Region: 63-96
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000235
Family LIM domain 0.0076
Further Details:      
 
Weak hits

Sequence:  XP_021403106.1.53032
Domain Number - Region: 161-191
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00134
Family LIM domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_021403106.1.53032
Sequence length 397
Comment LIM/homeobox protein Lhx9 isoform X1 [Lonchura striata domestica]; AA=GCF_002197715.1; RF=representative genome; TAX=299123; STAX=40157; NAME=Lonchura striata domestica; AL=Scaffold; RT=Major
Sequence
MEIVGCRAEENTCPFRPPAMLFHGISGGHIQGIMEEMERRSKTESRLAKGGQMNGRDTNM
PPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYC
KEDYYRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNL
VYCRAHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGAGTVQKGRPRKRKSPALGVDIV
SYNSGCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL
AQKTGLTKRVLQVWFQNARAKFRRNLLRQENGGVDKADGTSLPAPPSADSGALTPPGTAT
TLTDLTNPTITVVTSVTSNLDSHESGSPSQTTLTNLF
Download sequence
Identical sequences H0Z1Q2
59729.ENSTGUP00000004492 ENSTGUP00000004492 ENSTGUP00000004492 XP_012430549.1.42559 XP_021403106.1.53032 XP_021403114.1.53032

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