SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_021406903.1.53032 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_021406903.1.53032
Domain Number 1 Region: 354-568
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 1.83e-53
Family DBL homology domain (DH-domain) 0.0001
Further Details:      
 
Domain Number 2 Region: 867-1097
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000000428
Family Cell cycle arrest protein BUB3 0.088
Further Details:      
 
Domain Number 3 Region: 603-660,752-810
Classification Level Classification E-value
Superfamily PH domain-like 0.00000064
Family Pleckstrin-homology domain (PH domain) 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_021406903.1.53032
Sequence length 1314
Comment rho guanine nucleotide exchange factor 10 isoform X1 [Lonchura striata domestica]; AA=GCF_002197715.1; RF=representative genome; TAX=299123; STAX=40157; NAME=Lonchura striata domestica; AL=Scaffold; RT=Major
Sequence
MDTEDFPPPPPEVLEHEPKAMGLNDEEEDEGEQFDFDSGDEIPEADRQALVPPLPGPGNY
IENQEAGAAGGDNLENTEKLQTSEPAVEGTPAKVNPYSVINISPIQDKDPSSSPEPSPQD
ECASPSLSGGYSVPVPCGYAVPSNLPLILPAYSSPVIIRSVSVDEEGAQSAAEECHYNSV
NLEDPQNSEVNQTKKEDDVLAKWVSDPANTAWMENPDEVIYDDVPREDSDSEPEEMIYDD
VENGDDGGNSSLEYGWSSSEFESYEEQSDSECKNGIPSSFLRGNHKRHMQKLMRAAREGT
KDGLEKTKAAVKKGRSFIRTKSFISQDHRSSCLEEEELNLFIDVDCMHTEAIMTPMPEGL
SQQQVVRRYILGSVVDSEKNYVDALKRILEQYEKPLSDMEPKLLSERKLKMVFYRIKEIL
QCHSMFQIALASRVSEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVGILKKSCAT
KPAFLDFLKQCQESSPDRITLYGLMMKPIQRFPQFILLLQDMLKNTSKGHPDRLPLQMAL
TELETLAEKLNERKRDADQRCEIKQIAKAMNERYLNKLLSSGNRYLIRTDDMVETVYNDK
GEIIKTKERRLFMLNDVLMCATVNIRSSYESSGTMTTGQRYLLKWSVPLGQVDVIEYGSS
EGQGDNCRFPPQFSAENVIINSKPNKLYMGPGQLYHDLQNLLHDLNVLGQISQLISSLKG
NYQNLNQSVAHDWTSGLQKLILKKEDEIRAADRCRIQLQLPGKQDKSGRPTFFTAVFNTF
TPAIKQSWINNLQMAKLALAEDNLLGWFCIEDDGNQIKKEKHPLLVRHMPVMMAKQQEFK
IECAAYNPEPYLSGETESDSCAVEHGFLWIGSCTNQMGQIAIVSFQSSSPKVIECFNVES
RILCMVYIPEEEKLKELNKAPDSESVLTKTCNVPTICLGMEEGSISIYKSCQGSKKIRLQ
HFFTPEKSTVMSLTYRSQYLFAGLVNGNISIYTKAEDGTWNTEPQKIVKLGVLPVRSLLV
MEETIWAACGGQIFIISTVTHSIQNHFEAHQEEGMVISHMAVAGVGVWIAFTSGSTLRLF
HTETLKHLQDVNIATPVHNMLPGQQRVSVTSLLVCHGLLLVGTNLGIIVALPVPRLQGIP
KVTGRGMVSYHAHNSPVKFLVTATSINKKNRNKVRNSLPPGSEPKDDDQKNVLHSERPGS
SLSNAQDTAVWLGDSAGSIAQRSDLSSSSGSLTLSHGSSSLEHRPEDSNIYELLKDQNIS
FKSKRQKSKKMKASSVLVISGGQGHRRVNKKTKQQRQDELVSSVMVWQIPLLNI
Download sequence
Identical sequences A0A218VDY8
XP_021406902.1.53032 XP_021406903.1.53032 XP_021406904.1.53032 XP_021406906.1.53032

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]