SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_021468419.1.32639 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_021468419.1.32639
Domain Number 1 Region: 149-248
Classification Level Classification E-value
Superfamily Ubiquitin-like 7.11e-32
Family Ras-binding domain, RBD 0.0022
Further Details:      
 
Domain Number 2 Region: 288-400
Classification Level Classification E-value
Superfamily PH domain-like 9.86e-18
Family Pleckstrin-homology domain (PH domain) 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_021468419.1.32639
Sequence length 463
Comment amyloid beta A4 precursor protein-binding family B member 1-interacting protein-like [Oncorhynchus mykiss]; AA=GCF_002163495.1; RF=representative genome; TAX=8022; STAX=8022; NAME=Oncorhynchus mykiss; AL=Chromosome; RT=Major
Sequence
MDDIDSMFTDLLGEMDLLTQSLGYEMEPSEMSSSSQRENNFSIGFTDLNESLNELEDHDL
DALMADLGSDLSETEEKLNATKTGHVHTQQHKSGYSTQQQNVQAPISLSQMSSLVSSSSS
LPPEPRKPLPPGEAEAQAKTDKIKLALEKLKEAKVKKLVVKVMMSDGSSKTLMVDERQTV
RDVLDNLFEKTHCDFSMDWSLCETNPELQTERGFEDHEYLVEPLSAWTRDSKNQIIFLLR
PNKYLFFKDPQIFYLWKKDQISINEIKERHKELLLKENFDGPSLIVPDLEGLLYLREDGK
KSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQLDKVNIYTTTDYKQKYKAPSDFCFIL
KHPQIQKESQYIRFLCCDDEHTLSLWVNSIRVAKYGATLYKNYQMAVRRASTISSTLHLT
SLPASSPSTPTVHRANGHTPQEDLPEPPPDFIPPPPPGWGSGV
Download sequence
Identical sequences XP_021468419.1.32639

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]